RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 SOS2Q07890 1332 aaPredicted RBP38.17■■■■□ 3.7
CHCHD4-201ENST00000295767 COL16A1Q07092 1604 aaPredicted RBP38.17■■■■□ 3.7
CHCHD4-201ENST00000295767 KIF20BQ96Q89 1820 aa38.16■■■■□ 3.7
CHCHD4-201ENST00000295767 BRD4O60885 1362 aaPredicted RBP38.15■■■■□ 3.7
CHCHD4-201ENST00000295767 ALS2Q96Q42 1657 aa38.15■■■■□ 3.7
CHCHD4-201ENST00000295767 TTC21BQ7Z4L5 1316 aa38.13■■■■□ 3.69
CHCHD4-201ENST00000295767 PIK3C2AO00443 1686 aa38.12■■■■□ 3.69
CHCHD4-201ENST00000295767 PER1O15534 1290 aaPredicted RBP38.12■■■■□ 3.69
CHCHD4-201ENST00000295767 SBNO1A3KN83 1393 aa38.11■■■■□ 3.69
CHCHD4-201ENST00000295767 PAK3O75914 559 aaPredicted RBP38.11■■■■□ 3.69
CHCHD4-201ENST00000295767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.11■■■■□ 3.69
CHCHD4-201ENST00000295767 TNS3Q68CZ2 1445 aa38.08■■■■□ 3.69
CHCHD4-201ENST00000295767 TTC21AQ8NDW8 1320 aa38.08■■■■□ 3.69
CHCHD4-201ENST00000295767 KNSTRNQ9Y448 316 aa38.07■■■■□ 3.68
CHCHD4-201ENST00000295767 SPATA31A3Q5VYP0 1347 aa38.05■■■■□ 3.68
CHCHD4-201ENST00000295767 MARF1Q9Y4F3 1742 aaKnown RBP38.04■■■■□ 3.68
CHCHD4-201ENST00000295767 FBXO41Q8TF61 875 aa38.04■■■■□ 3.68
CHCHD4-201ENST00000295767 ANKRD26Q9UPS8 1709 aa38.04■■■■□ 3.68
CHCHD4-201ENST00000295767 NME9Q86XW9 330 aa38.03■■■■□ 3.68
CHCHD4-201ENST00000295767 CGNL1Q0VF96 1302 aa38.03■■■■□ 3.68
CHCHD4-201ENST00000295767 USP54Q70EL1 1684 aa38.01■■■■□ 3.68
CHCHD4-201ENST00000295767 LMOD2Q6P5Q4 547 aa38■■■■□ 3.67
CHCHD4-201ENST00000295767 ABTB2Q8N961 1025 aa38■■■■□ 3.67
CHCHD4-201ENST00000295767 FYB1O15117 783 aa37.99■■■■□ 3.67
CHCHD4-201ENST00000295767 HSPA1LP34931 641 aa37.99■■■■□ 3.67
CHCHD4-201ENST00000295767 AMER1Q5JTC6 1135 aaPredicted RBP37.99■■■■□ 3.67
CHCHD4-201ENST00000295767 LRRC59Q96AG4 307 aaKnown RBP37.99■■■■□ 3.67
CHCHD4-201ENST00000295767 ZRANB1Q9UGI0 708 aa37.98■■■■□ 3.67
CHCHD4-201ENST00000295767 ARHGEF10O15013 1369 aa37.97■■■■□ 3.67
CHCHD4-201ENST00000295767 NUTM2GQ5VZR2 741 aa37.96■■■■□ 3.67
CHCHD4-201ENST00000295767 CRYBG1Q9Y4K1 1723 aa37.96■■■■□ 3.67
CHCHD4-201ENST00000295767 GGNBP2Q9H3C7 697 aa37.95■■■■□ 3.67
CHCHD4-201ENST00000295767 COL22A1Q8NFW1 1626 aaPredicted RBP37.94■■■■□ 3.66
CHCHD4-201ENST00000295767 OVOS2A0A0J9YW53 1432 aa37.94■■■■□ 3.66
CHCHD4-201ENST00000295767 OVOS2Q6IE36 1432 aa37.94■■■■□ 3.66
CHCHD4-201ENST00000295767 SHPRHQ149N8 1683 aa37.94■■■■□ 3.66
CHCHD4-201ENST00000295767 NSD2O96028 1365 aa37.93■■■■□ 3.66
CHCHD4-201ENST00000295767 USP31Q70CQ4 1352 aa37.93■■■■□ 3.66
CHCHD4-201ENST00000295767 MED1Q15648 1581 aaPredicted RBP37.93■■■■□ 3.66
CHCHD4-201ENST00000295767 ABCA3Q99758 1704 aa37.92■■■■□ 3.66
CHCHD4-201ENST00000295767 NLRP6P59044 892 aa37.92■■■■□ 3.66
CHCHD4-201ENST00000295767 NPC1L1Q9UHC9 1359 aa37.92■■■■□ 3.66
CHCHD4-201ENST00000295767 PNPLA6Q8IY17 1366 aa37.91■■■■□ 3.66
CHCHD4-201ENST00000295767 PHRF1Q9P1Y6 1649 aaKnown RBP37.9■■■■□ 3.66
CHCHD4-201ENST00000295767 CC2D1BQ5T0F9 858 aaKnown RBP37.9■■■■□ 3.66
CHCHD4-201ENST00000295767 CNGB1Q14028 1251 aaPredicted RBP37.89■■■■□ 3.66
CHCHD4-201ENST00000295767 NLRP13Q86W25 1043 aa37.88■■■■□ 3.65
CHCHD4-201ENST00000295767 COG3Q96JB2 828 aa37.87■■■■□ 3.65
CHCHD4-201ENST00000295767 SLIT3O75094 1523 aa37.85■■■■□ 3.65
CHCHD4-201ENST00000295767 PLEKHG5O94827 1062 aa37.85■■■■□ 3.65
CHCHD4-201ENST00000295767 USP19O94966 1318 aa37.85■■■■□ 3.65
CHCHD4-201ENST00000295767 JCADQ9P266 1359 aa37.84■■■■□ 3.65
CHCHD4-201ENST00000295767 CABLES1Q8TDN4 633 aa37.81■■■■□ 3.64
CHCHD4-201ENST00000295767 MORC1Q86VD1 984 aa37.78■■■■□ 3.64
CHCHD4-201ENST00000295767 NFAT5O94916 1531 aa37.77■■■■□ 3.64
CHCHD4-201ENST00000295767 MAP2P11137 1827 aaKnown RBP37.75■■■■□ 3.63
CHCHD4-201ENST00000295767 DIEXFQ68CQ4 756 aaKnown RBP37.75■■■■□ 3.63
CHCHD4-201ENST00000295767 SOX12O15370 315 aa37.74■■■■□ 3.63
CHCHD4-201ENST00000295767 PARD3Q8TEW0 1356 aa37.74■■■■□ 3.63
CHCHD4-201ENST00000295767 LTN1O94822 1766 aa37.73■■■■□ 3.63
CHCHD4-201ENST00000295767 GCP02774 474 aa37.73■■■■□ 3.63
CHCHD4-201ENST00000295767 TNNT2P45379 298 aaPredicted RBP37.72■■■■□ 3.63
CHCHD4-201ENST00000295767 FBLN1P23142 703 aa37.7■■■■□ 3.63
CHCHD4-201ENST00000295767 KCNH5Q8NCM2 988 aa37.7■■■■□ 3.63
CHCHD4-201ENST00000295767 HAP1P54257 671 aaPredicted RBP37.69■■■■□ 3.62
CHCHD4-201ENST00000295767 PRKRIP1Q9H875 184 aaPredicted RBP37.68■■■■□ 3.62
CHCHD4-201ENST00000295767 SPATA31A6Q5VVP1 1343 aa37.66■■■■□ 3.62
CHCHD4-201ENST00000295767 AATKQ6ZMQ8 1374 aa37.66■■■■□ 3.62
CHCHD4-201ENST00000295767 RALBP1Q15311 655 aa37.65■■■■□ 3.62
CHCHD4-201ENST00000295767 NUTM2BA6NNL0 878 aaPredicted RBP37.64■■■■□ 3.62
CHCHD4-201ENST00000295767 NUTM2EB1AL46 878 aaPredicted RBP37.64■■■■□ 3.62
CHCHD4-201ENST00000295767 ANP32CO43423 234 aa37.64■■■■□ 3.62
CHCHD4-201ENST00000295767 NUTM2AQ8IVF1 878 aaPredicted RBP37.64■■■■□ 3.62
CHCHD4-201ENST00000295767 ZC3H6P61129 1189 aaKnown RBP37.62■■■■□ 3.61
CHCHD4-201ENST00000295767 LRP6O75581 1613 aa37.62■■■■□ 3.61
CHCHD4-201ENST00000295767 PEAK1Q9H792 1746 aa37.61■■■■□ 3.61
CHCHD4-201ENST00000295767 RRS1Q15050 365 aaKnown RBP37.61■■■■□ 3.61
CHCHD4-201ENST00000295767 CPDO75976 1380 aa37.59■■■■□ 3.61
CHCHD4-201ENST00000295767 KIAA0232Q92628 1395 aa37.59■■■■□ 3.61
CHCHD4-201ENST00000295767 MAP3K19Q56UN5 1328 aa37.58■■■■□ 3.61
CHCHD4-201ENST00000295767 ARHGEF25Q86VW2 580 aa37.58■■■■□ 3.61
CHCHD4-201ENST00000295767 COL18A1P39060 1754 aa37.57■■■■□ 3.6
CHCHD4-201ENST00000295767 PPP2R1AP30153 589 aa37.57■■■■□ 3.6
CHCHD4-201ENST00000295767 EMILIN1Q9Y6C2 1016 aa37.57■■■■□ 3.6
CHCHD4-201ENST00000295767 POLKQ9UBT6 870 aa37.56■■■■□ 3.6
CHCHD4-201ENST00000295767 SMG6Q86US8 1419 aaKnown RBP37.56■■■■□ 3.6
CHCHD4-201ENST00000295767 RGPD5Q99666 1765 aa37.56■■■■□ 3.6
CHCHD4-201ENST00000295767 ZBTB7CA1YPR0 619 aa37.55■■■■□ 3.6
CHCHD4-201ENST00000295767 ADAMTS2O95450 1211 aa37.55■■■■□ 3.6
CHCHD4-201ENST00000295767 ILDR1Q86SU0 546 aaPredicted RBP37.55■■■■□ 3.6
CHCHD4-201ENST00000295767 COL14A1Q05707 1796 aaKnown RBP37.54■■■■□ 3.6
CHCHD4-201ENST00000295767 MYBBP1AQ9BQG0 1328 aaKnown RBP37.53■■■■□ 3.6
CHCHD4-201ENST00000295767 LMO7Q8WWI1 1683 aa37.52■■■■□ 3.6
CHCHD4-201ENST00000295767 PRDM11Q9NQV5 511 aa37.52■■■■□ 3.6
CHCHD4-201ENST00000295767 PLCH1Q4KWH8 1693 aa37.51■■■■□ 3.59
CHCHD4-201ENST00000295767 CHRNA2Q15822 529 aa37.5■■■■□ 3.59
CHCHD4-201ENST00000295767 PPM1GO15355 546 aaPredicted RBP37.5■■■■□ 3.59
CHCHD4-201ENST00000295767 MTHFSP49914 203 aa37.5■■■■□ 3.59
CHCHD4-201ENST00000295767 ABCC6O95255 1503 aa37.5■■■■□ 3.59
CHCHD4-201ENST00000295767 RTL1A6NKG5 1358 aa37.48■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms