RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TNS3Q68CZ2 1445 aa31.2■■■□□ 2.58
LINC01116-201ENST00000295549 PAK3O75914 559 aaPredicted RBP31.19■■■□□ 2.58
LINC01116-201ENST00000295549 PANK3Q9H999 370 aa31.19■■■□□ 2.58
LINC01116-201ENST00000295549 EDC4Q6P2E9 1401 aaKnown RBP31.19■■■□□ 2.58
LINC01116-201ENST00000295549 TTC21BQ7Z4L5 1316 aa31.18■■■□□ 2.58
LINC01116-201ENST00000295549 TRPM3Q9HCF6 1732 aaPredicted RBP31.18■■■□□ 2.58
LINC01116-201ENST00000295549 ZNF316A6NFI3 1004 aaPredicted RBP31.17■■■□□ 2.58
LINC01116-201ENST00000295549 TTC21AQ8NDW8 1320 aa31.17■■■□□ 2.58
LINC01116-201ENST00000295549 CARD14Q9BXL6 1004 aa31.16■■■□□ 2.58
LINC01116-201ENST00000295549 ARHGEF10O15013 1369 aa31.16■■■□□ 2.58
LINC01116-201ENST00000295549 JCADQ9P266 1359 aa31.16■■■□□ 2.58
LINC01116-201ENST00000295549 MON2Q7Z3U7 1717 aa31.16■■■□□ 2.58
LINC01116-201ENST00000295549 PNPLA6Q8IY17 1366 aa31.13■■■□□ 2.57
LINC01116-201ENST00000295549 LMOD2Q6P5Q4 547 aa31.13■■■□□ 2.57
LINC01116-201ENST00000295549 ABTB2Q8N961 1025 aa31.13■■■□□ 2.57
LINC01116-201ENST00000295549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.12■■■□□ 2.57
LINC01116-201ENST00000295549 NRKQ7Z2Y5 1582 aa31.12■■■□□ 2.57
LINC01116-201ENST00000295549 ALS2Q96Q42 1657 aa31.1■■■□□ 2.57
LINC01116-201ENST00000295549 NSD3Q9BZ95 1437 aa31.09■■■□□ 2.57
LINC01116-201ENST00000295549 PER1O15534 1290 aaPredicted RBP31.06■■■□□ 2.56
LINC01116-201ENST00000295549 NLRP13Q86W25 1043 aa31.06■■■□□ 2.56
LINC01116-201ENST00000295549 SHPRHQ149N8 1683 aa31.05■■■□□ 2.56
LINC01116-201ENST00000295549 NLRP6P59044 892 aa31.05■■■□□ 2.56
LINC01116-201ENST00000295549 NME9Q86XW9 330 aa31.05■■■□□ 2.56
LINC01116-201ENST00000295549 SPATA31A6Q5VVP1 1343 aa31.05■■■□□ 2.56
LINC01116-201ENST00000295549 FYB1O15117 783 aa31.04■■■□□ 2.56
LINC01116-201ENST00000295549 NUTM2GQ5VZR2 741 aa31.04■■■□□ 2.56
LINC01116-201ENST00000295549 KNSTRNQ9Y448 316 aa31.04■■■□□ 2.56
LINC01116-201ENST00000295549 CGNL1Q0VF96 1302 aa31.04■■■□□ 2.56
LINC01116-201ENST00000295549 USP31Q70CQ4 1352 aa31.04■■■□□ 2.56
LINC01116-201ENST00000295549 COL22A1Q8NFW1 1626 aaPredicted RBP31.03■■■□□ 2.56
LINC01116-201ENST00000295549 PIK3C2AO00443 1686 aa31.02■■■□□ 2.56
LINC01116-201ENST00000295549 USP19O94966 1318 aa31■■■□□ 2.55
LINC01116-201ENST00000295549 DDX10Q13206 875 aaKnown RBP30.99■■■□□ 2.55
LINC01116-201ENST00000295549 MED1Q15648 1581 aaPredicted RBP30.99■■■□□ 2.55
LINC01116-201ENST00000295549 ZRANB1Q9UGI0 708 aa30.98■■■□□ 2.55
LINC01116-201ENST00000295549 CABLES1Q8TDN4 633 aa30.98■■■□□ 2.55
LINC01116-201ENST00000295549 AMER1Q5JTC6 1135 aaPredicted RBP30.96■■■□□ 2.55
LINC01116-201ENST00000295549 COG3Q96JB2 828 aa30.96■■■□□ 2.55
LINC01116-201ENST00000295549 GGNBP2Q9H3C7 697 aa30.96■■■□□ 2.55
LINC01116-201ENST00000295549 OVOS2A0A0J9YW53 1432 aa30.96■■■□□ 2.55
LINC01116-201ENST00000295549 OVOS2Q6IE36 1432 aa30.96■■■□□ 2.55
LINC01116-201ENST00000295549 NSD2O96028 1365 aa30.94■■■□□ 2.54
LINC01116-201ENST00000295549 GCP02774 474 aa30.93■■■□□ 2.54
LINC01116-201ENST00000295549 NUTM2BA6NNL0 878 aaPredicted RBP30.92■■■□□ 2.54
LINC01116-201ENST00000295549 NUTM2EB1AL46 878 aaPredicted RBP30.92■■■□□ 2.54
LINC01116-201ENST00000295549 PLEKHG5O94827 1062 aa30.92■■■□□ 2.54
LINC01116-201ENST00000295549 NUTM2AQ8IVF1 878 aaPredicted RBP30.92■■■□□ 2.54
LINC01116-201ENST00000295549 USP54Q70EL1 1684 aa30.91■■■□□ 2.54
LINC01116-201ENST00000295549 NPC1L1Q9UHC9 1359 aa30.91■■■□□ 2.54
LINC01116-201ENST00000295549 HAP1P54257 671 aaPredicted RBP30.91■■■□□ 2.54
LINC01116-201ENST00000295549 KCNH5Q8NCM2 988 aa30.91■■■□□ 2.54
LINC01116-201ENST00000295549 SLIT3O75094 1523 aa30.91■■■□□ 2.54
LINC01116-201ENST00000295549 CRYBG1Q9Y4K1 1723 aa30.88■■■□□ 2.53
LINC01116-201ENST00000295549 MARF1Q9Y4F3 1742 aaKnown RBP30.87■■■□□ 2.53
LINC01116-201ENST00000295549 LRP6O75581 1613 aa30.87■■■□□ 2.53
LINC01116-201ENST00000295549 KIF20BQ96Q89 1820 aa30.87■■■□□ 2.53
LINC01116-201ENST00000295549 ABCA3Q99758 1704 aa30.84■■■□□ 2.53
LINC01116-201ENST00000295549 ADAMTS2O95450 1211 aa30.84■■■□□ 2.53
LINC01116-201ENST00000295549 PHRF1Q9P1Y6 1649 aaKnown RBP30.84■■■□□ 2.53
LINC01116-201ENST00000295549 CPDO75976 1380 aa30.83■■■□□ 2.53
LINC01116-201ENST00000295549 ZC3H6P61129 1189 aaKnown RBP30.81■■■□□ 2.52
LINC01116-201ENST00000295549 CC2D1BQ5T0F9 858 aaKnown RBP30.81■■■□□ 2.52
LINC01116-201ENST00000295549 MORC1Q86VD1 984 aa30.81■■■□□ 2.52
LINC01116-201ENST00000295549 SOX12O15370 315 aa30.81■■■□□ 2.52
LINC01116-201ENST00000295549 NFAT5O94916 1531 aa30.81■■■□□ 2.52
LINC01116-201ENST00000295549 KIAA0232Q92628 1395 aa30.8■■■□□ 2.52
LINC01116-201ENST00000295549 ARHGEF25Q86VW2 580 aa30.8■■■□□ 2.52
LINC01116-201ENST00000295549 MEX3CQ5U5Q3 659 aaKnown RBP30.79■■■□□ 2.52
LINC01116-201ENST00000295549 FAM83GA6ND36 823 aa30.77■■■□□ 2.52
LINC01116-201ENST00000295549 PRDM11Q9NQV5 511 aa30.77■■■□□ 2.52
LINC01116-201ENST00000295549 AATKQ6ZMQ8 1374 aa30.76■■■□□ 2.52
LINC01116-201ENST00000295549 ANKRD26Q9UPS8 1709 aa30.76■■■□□ 2.51
LINC01116-201ENST00000295549 FBLN1P23142 703 aa30.75■■■□□ 2.51
LINC01116-201ENST00000295549 C8orf37Q96NL8 207 aa30.75■■■□□ 2.51
LINC01116-201ENST00000295549 NGLY1Q96IV0 654 aa30.73■■■□□ 2.51
LINC01116-201ENST00000295549 TNNT2P45379 298 aaPredicted RBP30.72■■■□□ 2.51
LINC01116-201ENST00000295549 FNBP4Q8N3X1 1017 aaPredicted RBP30.72■■■□□ 2.51
LINC01116-201ENST00000295549 MAP3K19Q56UN5 1328 aa30.71■■■□□ 2.51
LINC01116-201ENST00000295549 CNGB1Q14028 1251 aaPredicted RBP30.71■■■□□ 2.51
LINC01116-201ENST00000295549 RRS1Q15050 365 aaKnown RBP30.71■■■□□ 2.51
LINC01116-201ENST00000295549 CHRNA2Q15822 529 aa30.71■■■□□ 2.51
LINC01116-201ENST00000295549 ZBTB7CA1YPR0 619 aa30.68■■■□□ 2.5
LINC01116-201ENST00000295549 POLKQ9UBT6 870 aa30.68■■■□□ 2.5
LINC01116-201ENST00000295549 SLIT2O94813 1529 aa30.68■■■□□ 2.5
LINC01116-201ENST00000295549 KIF24Q5T7B8 1368 aa30.67■■■□□ 2.5
LINC01116-201ENST00000295549 COL14A1Q05707 1796 aaKnown RBP30.67■■■□□ 2.5
LINC01116-201ENST00000295549 PARD3Q8TEW0 1356 aa30.66■■■□□ 2.5
LINC01116-201ENST00000295549 ABCC6O95255 1503 aa30.66■■■□□ 2.5
LINC01116-201ENST00000295549 IP6K1Q92551 441 aa30.65■■■□□ 2.5
LINC01116-201ENST00000295549 BTG4Q9NY30 223 aa30.65■■■□□ 2.5
LINC01116-201ENST00000295549 EMILIN1Q9Y6C2 1016 aa30.65■■■□□ 2.5
LINC01116-201ENST00000295549 AMPHP49418 695 aa30.64■■■□□ 2.5
LINC01116-201ENST00000295549 RALBP1Q15311 655 aa30.64■■■□□ 2.5
LINC01116-201ENST00000295549 AXIN2Q9Y2T1 843 aa30.64■■■□□ 2.5
LINC01116-201ENST00000295549 AFF2P51816 1311 aa30.64■■■□□ 2.5
LINC01116-201ENST00000295549 RTL1A6NKG5 1358 aa30.64■■■□□ 2.5
LINC01116-201ENST00000295549 BCL9LQ86UU0 1499 aa30.62■■■□□ 2.49
LINC01116-201ENST00000295549 HOXC9P31274 260 aa30.62■■■□□ 2.49
LINC01116-201ENST00000295549 LMO7Q8WWI1 1683 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms