RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TCEAL9Q9UHQ7 104 aa21.59■■□□□ 1.05
CDC42EP3-201ENST00000295324 PTPN23Q9H3S7 1636 aa21.58■■□□□ 1.05
CDC42EP3-201ENST00000295324 WASHC4Q2M389 1173 aa21.58■■□□□ 1.04
CDC42EP3-201ENST00000295324 NCOA1Q15788 1441 aa21.57■■□□□ 1.04
CDC42EP3-201ENST00000295324 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
CDC42EP3-201ENST00000295324 PANK1Q8TE04 598 aa21.57■■□□□ 1.04
CDC42EP3-201ENST00000295324 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 PPP1R1BQ9UD71 204 aaPredicted RBP21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 FCHSD2O94868 740 aa21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 IPO9Q96P70 1041 aaKnown RBP21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 LNPKQ9C0E8 428 aa21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 CWC22Q9HCG8 908 aaKnown RBP21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
CDC42EP3-201ENST00000295324 PDE4AP27815 886 aa21.55■■□□□ 1.04
CDC42EP3-201ENST00000295324 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
CDC42EP3-201ENST00000295324 GZF1Q9H116 711 aaPredicted RBP21.55■■□□□ 1.04
CDC42EP3-201ENST00000295324 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
CDC42EP3-201ENST00000295324 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
CDC42EP3-201ENST00000295324 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
CDC42EP3-201ENST00000295324 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
CDC42EP3-201ENST00000295324 RALYLQ86SE5 291 aaKnown RBP21.54■■□□□ 1.04
CDC42EP3-201ENST00000295324 FOXO3O43524 673 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 PHF14O94880 888 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 MCTP1Q6DN14 999 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 ERC1Q8IUD2 1116 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 NSD3Q9BZ95 1437 aa21.53■■□□□ 1.04
CDC42EP3-201ENST00000295324 CREBRFQ8IUR6 639 aa21.52■■□□□ 1.04
CDC42EP3-201ENST00000295324 WASLO00401 505 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP3-201ENST00000295324 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP3-201ENST00000295324 TNRQ92752 1358 aa21.52■■□□□ 1.04
CDC42EP3-201ENST00000295324 FOXD4L5Q5VV16 416 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP3-201ENST00000295324 FOXD4L4Q8WXT5 416 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP3-201ENST00000295324 CNNM1Q9NRU3 951 aa21.51■■□□□ 1.03
CDC42EP3-201ENST00000295324 GNAI2P04899 355 aa21.51■■□□□ 1.03
CDC42EP3-201ENST00000295324 CCT4P50991 539 aaKnown RBP21.51■■□□□ 1.03
CDC42EP3-201ENST00000295324 CADPS2Q86UW7 1296 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 GNL3LQ9NVN8 582 aaKnown RBP21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 BTBD11A6QL63 1104 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 PLCH2O75038 1416 aa21.5■■□□□ 1.03
CDC42EP3-201ENST00000295324 TSR2Q969E8 191 aaKnown RBP21.49■■□□□ 1.03
CDC42EP3-201ENST00000295324 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
CDC42EP3-201ENST00000295324 FSD1Q9BTV5 496 aa21.48■■□□□ 1.03
CDC42EP3-201ENST00000295324 DEKP35659 375 aaKnown RBP21.48■■□□□ 1.03
CDC42EP3-201ENST00000295324 FYB1O15117 783 aa21.48■■□□□ 1.03
CDC42EP3-201ENST00000295324 CDCA7LQ96GN5 454 aa21.48■■□□□ 1.03
CDC42EP3-201ENST00000295324 FAM135AQ9P2D6 1515 aa21.47■■□□□ 1.03
CDC42EP3-201ENST00000295324 GNAT3A8MTJ3 354 aa21.47■■□□□ 1.03
CDC42EP3-201ENST00000295324 STARD3NLO95772 234 aa21.47■■□□□ 1.03
CDC42EP3-201ENST00000295324 ADAMTS2O95450 1211 aa21.46■■□□□ 1.03
CDC42EP3-201ENST00000295324 MYL6BP14649 208 aa21.46■■□□□ 1.03
CDC42EP3-201ENST00000295324 NFE2L2Q16236 605 aa21.46■■□□□ 1.03
CDC42EP3-201ENST00000295324 ATP10BO94823 1461 aa21.46■■□□□ 1.03
CDC42EP3-201ENST00000295324 NGLY1Q96IV0 654 aa21.46■■□□□ 1.03
CDC42EP3-201ENST00000295324 AMOTQ4VCS5 1084 aa21.45■■□□□ 1.02
CDC42EP3-201ENST00000295324 CCDC158Q5M9N0 1113 aa21.45■■□□□ 1.02
CDC42EP3-201ENST00000295324 PDE3AQ14432 1141 aa21.45■■□□□ 1.02
CDC42EP3-201ENST00000295324 SAMD1Q6SPF0 538 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP3-201ENST00000295324 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CDC42EP3-201ENST00000295324 DDX11L8A8MPP1 907 aa21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 TPD52L1Q16890 204 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 AMER1Q5JTC6 1135 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 CDC45O75419 566 aa21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 SAFBQ15424 915 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
CDC42EP3-201ENST00000295324 KRT28Q7Z3Y7 464 aa21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 NOS1P29475 1434 aa21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 HIP1O00291 1037 aa21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 CCDC47Q96A33 483 aaKnown RBP21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 TMOD3Q9NYL9 352 aa21.43■■□□□ 1.02
CDC42EP3-201ENST00000295324 CCDC57Q2TAC2 916 aa21.42■■□□□ 1.02
CDC42EP3-201ENST00000295324 NME9Q86XW9 330 aa21.42■■□□□ 1.02
CDC42EP3-201ENST00000295324 WDR7Q9Y4E6 1490 aa21.42■■□□□ 1.02
CDC42EP3-201ENST00000295324 DNAJC2Q99543 621 aaKnown RBP21.42■■□□□ 1.02
CDC42EP3-201ENST00000295324 SART3Q15020 963 aaKnown RBP21.41■■□□□ 1.02
CDC42EP3-201ENST00000295324 SLC3A2P08195 630 aaKnown RBP21.41■■□□□ 1.02
CDC42EP3-201ENST00000295324 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 GOLGA6L3A6NEY3 463 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 PES1O00541 588 aaKnown RBP21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 PSMA5P28066 241 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 TTC39AQ5SRH9 613 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 CEP89Q96ST8 783 aa21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 ANO8Q9HCE9 1232 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP3-201ENST00000295324 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.02
CDC42EP3-201ENST00000295324 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.02
CDC42EP3-201ENST00000295324 SMC3Q9UQE7 1217 aa21.39■■□□□ 1.01
CDC42EP3-201ENST00000295324 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 CCDC43Q96MW1 224 aaKnown RBP21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 MSH6P52701 1360 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms