RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
PKNOX1-201ENST00000291547 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
PKNOX1-201ENST00000291547 APAF1O14727 1248 aa12.96□□□□□ -0.33
PKNOX1-201ENST00000291547 RDXP35241 583 aaKnown RBP12.96□□□□□ -0.33
PKNOX1-201ENST00000291547 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.33
PKNOX1-201ENST00000291547 MAGI3Q5TCQ9 1506 aa12.96□□□□□ -0.33
PKNOX1-201ENST00000291547 DCTN1Q14203 1278 aa12.96□□□□□ -0.34
PKNOX1-201ENST00000291547 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.34
PKNOX1-201ENST00000291547 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-201ENST00000291547 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
PKNOX1-201ENST00000291547 USP47Q96K76 1375 aa12.95□□□□□ -0.34
PKNOX1-201ENST00000291547 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
PKNOX1-201ENST00000291547 TRDNQ13061 729 aa12.95□□□□□ -0.34
PKNOX1-201ENST00000291547 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 FOSBP53539 338 aa12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 PDILTQ8N807 584 aa12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 TSPYL1Q9H0U9 437 aa12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 TCEAL9Q9UHQ7 104 aa12.94□□□□□ -0.34
PKNOX1-201ENST00000291547 TRAK2O60296 914 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 CT47A1Q5JQC4 288 aaPredicted RBP12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 RAD21O60216 631 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 CLCN1P35523 988 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 TRIM5Q9C035 493 aa12.93□□□□□ -0.34
PKNOX1-201ENST00000291547 TRAPPC8Q9Y2L5 1435 aa12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 HMGN5P82970 282 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 OFD1O75665 1012 aa12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 ZNF518AQ6AHZ1 1483 aa12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 CCDC173Q0VFZ6 552 aa12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 NAT10Q9H0A0 1025 aaKnown RBP12.92□□□□□ -0.34
PKNOX1-201ENST00000291547 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 POGZQ7Z3K3 1410 aa12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 CAVIN1Q6NZI2 390 aaKnown RBP12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 KDM5BQ9UGL1 1544 aa12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 TEFQ10587 303 aa12.91□□□□□ -0.34
PKNOX1-201ENST00000291547 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 OLFM4Q6UX06 510 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 PLCD4Q9BRC7 762 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 SHANK2Q9UPX8 1470 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 HSP90AB3PQ58FF7 597 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 AMOTL1Q8IY63 956 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
PKNOX1-201ENST00000291547 DUOX2Q9NRD8 1548 aa12.9□□□□□ -0.35
PKNOX1-201ENST00000291547 DNMT1P26358 1616 aaKnown RBP12.89□□□□□ -0.35
PKNOX1-201ENST00000291547 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
PKNOX1-201ENST00000291547 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
PKNOX1-201ENST00000291547 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
PKNOX1-201ENST00000291547 ESPNB1AK53 854 aa12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 MBD3O95983 291 aa12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 SKIDA1Q1XH10 827 aa12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 ABCC10Q5T3U5 1492 aa12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
PKNOX1-201ENST00000291547 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 ERICH2A1L162 156 aa12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
PKNOX1-201ENST00000291547 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.353e-7■■■■□ 21.7
PKNOX1-201ENST00000291547 SMC2O95347 1197 aa12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 COG3Q96JB2 828 aa12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 CDC45O75419 566 aa12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKNOX1-201ENST00000291547 A2MP01023 1474 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 PRPF40AO75400 957 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 RIPK4P57078 832 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 CTDP1Q9Y5B0 961 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 ERC2O15083 957 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms