RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 STRN4Q9NRL3 753 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 ZC3H6P61129 1189 aaKnown RBP5.88□□□□□ -1.47
UBR1-201ENST00000290650 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 RNF214Q8ND24 703 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 DIAPH3Q9NSV4 1193 aa5.88□□□□□ -1.47
UBR1-201ENST00000290650 PZPP20742 1482 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
UBR1-201ENST00000290650 EXOC6BQ9Y2D4 811 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 DISP1Q96F81 1524 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
UBR1-201ENST00000290650 RIC3Q7Z5B4 369 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 TTC5Q8N0Z6 440 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 API5Q9BZZ5 524 aaKnown RBP5.87□□□□□ -1.47
UBR1-201ENST00000290650 NEUROD6Q96NK8 337 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 CARD14Q9BXL6 1004 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 IFIT2P09913 472 aaKnown RBP5.87□□□□□ -1.47
UBR1-201ENST00000290650 DMRT2Q9Y5R5 561 aa5.87□□□□□ -1.47
UBR1-201ENST00000290650 UBTFL1P0CB47 393 aaPredicted RBP5.87□□□□□ -1.47
UBR1-201ENST00000290650 VPS37CA5D8V6 355 aaPredicted RBP5.86□□□□□ -1.47
UBR1-201ENST00000290650 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 DNMT1P26358 1616 aaKnown RBP5.86□□□□□ -1.47
UBR1-201ENST00000290650 ABCA5Q8WWZ7 1642 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 PRAG1Q86YV5 1406 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 KRT24Q2M2I5 525 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 JARID2Q92833 1246 aaPredicted RBP5.86□□□□□ -1.47
UBR1-201ENST00000290650 TESK2Q96S53 571 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 ANXA1P04083 346 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 TRIM27P14373 513 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 PDE3AQ14432 1141 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 PLEKHH1Q9ULM0 1364 aa5.86□□□□□ -1.47
UBR1-201ENST00000290650 NKTRP30414 1462 aaKnown RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 CEP170Q5SW79 1584 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 CHD1LQ86WJ1 897 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 NEK4P51957 841 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 NUTM1Q86Y26 1132 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 HDGFL1Q5TGJ6 251 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 KDM5BQ9UGL1 1544 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 APPP05067 770 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 RLBP1P12271 317 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 DNAJC2Q99543 621 aaKnown RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 CHMP5Q9NZZ3 219 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 GTF2E1P29083 439 aaPredicted RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 STK3Q13188 491 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 INTS3Q68E01 1043 aaKnown RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 CAVIN1Q6NZI2 390 aaKnown RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 PCDHB15Q9Y5E8 787 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 DHX29Q7Z478 1369 aaKnown RBP5.85□□□□□ -1.47
UBR1-201ENST00000290650 DDX11L8A8MPP1 907 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 H3BQV1 296 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 IFFO2Q5TF58 517 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 RALGAPBQ86X10 1494 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 TSPOAP1O95153 1857 aa5.85□□□□□ -1.47
UBR1-201ENST00000290650 FYB1O15117 783 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 ATF3P18847 181 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 CEBPZQ03701 1054 aaKnown RBP5.84□□□□□ -1.47
UBR1-201ENST00000290650 AEBP1Q8IUX7 1158 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 WDR63Q8IWG1 891 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 SCAF11Q99590 1463 aaKnown RBP5.84□□□□□ -1.47
UBR1-201ENST00000290650 TRAK2O60296 914 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 RAPGEF4Q8WZA2 1011 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 MTMR7Q9Y216 660 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 SEC24BO95487 1268 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 NEXNQ0ZGT2 675 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 SLC52A1Q9NWF4 448 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 DTNBO60941 627 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 CDC45O75419 566 aa5.84□□□□□ -1.47
UBR1-201ENST00000290650 PIP4K2AP48426 406 aaPredicted RBP5.84□□□□□ -1.47
UBR1-201ENST00000290650 G3BP1Q13283 466 aaKnown RBP eCLIP5.84□□□□□ -1.47
UBR1-201ENST00000290650 PROSER2Q86WR7 435 aaPredicted RBP5.84□□□□□ -1.47
UBR1-201ENST00000290650 TCOF1Q13428 1488 aaKnown RBP5.84□□□□□ -1.47
UBR1-201ENST00000290650 SAMD9Q5K651 1589 aa5.84□□□□□ -1.48
UBR1-201ENST00000290650 ASXL2Q76L83 1435 aa5.84□□□□□ -1.48
UBR1-201ENST00000290650 PRPF40AO75400 957 aaKnown RBP5.84□□□□□ -1.48
UBR1-201ENST00000290650 NFE2L2Q16236 605 aa5.84□□□□□ -1.48
UBR1-201ENST00000290650 MPRIPQ6WCQ1 1025 aa5.84□□□□□ -1.48
UBR1-201ENST00000290650 FOXO3O43524 673 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 PPFIA3O75145 1194 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 REC8O95072 547 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 ZNF530Q6P9A1 599 aaPredicted RBP5.83□□□□□ -1.48
UBR1-201ENST00000290650 HSP90AB2PQ58FF8 381 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 FAM184AQ8NB25 1140 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 CCDC61Q9Y6R9 512 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 GCC2Q8IWJ2 1684 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 CCDC30Q5VVM6 783 aa5.83□□□□□ -1.48
UBR1-201ENST00000290650 CWC27Q6UX04 472 aaKnown RBP5.83□□□□□ -1.48
UBR1-201ENST00000290650 C16orf71Q8IYS4 520 aaPredicted RBP5.83□□□□□ -1.48
UBR1-201ENST00000290650 RBM42Q9BTD8 480 aaKnown RBP5.83□□□□□ -1.48
UBR1-201ENST00000290650 RAD21O60216 631 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 GNAI2P04899 355 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 TSPYL6Q8N831 410 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 TEX14Q8IWB6 1497 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 A2MP01023 1474 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 BTBD11A6QL63 1104 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 TARBP1Q13395 1621 aaKnown RBP5.82□□□□□ -1.48
UBR1-201ENST00000290650 PER1O15534 1290 aaPredicted RBP5.82□□□□□ -1.48
UBR1-201ENST00000290650 STAC3Q96MF2 364 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 C14orf93Q9H972 538 aaKnown RBP5.82□□□□□ -1.48
UBR1-201ENST00000290650 AMOTL2Q9Y2J4 779 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 SRGAP3O43295 1099 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 SF3A1Q15459 793 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms