RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
SHROOM4-201ENST00000289292 FYB1O15117 783 aa18.4■□□□□ 0.54
SHROOM4-201ENST00000289292 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
SHROOM4-201ENST00000289292 LRRFIP1Q32MZ4 808 aaKnown RBP18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 NOM1Q5C9Z4 860 aaKnown RBP18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 OLFM4Q6UX06 510 aa18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 NAT10Q9H0A0 1025 aaKnown RBP18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 TMX4Q9H1E5 349 aaPredicted RBP18.39■□□□□ 0.53
SHROOM4-201ENST00000289292 ESPNB1AK53 854 aa18.38■□□□□ 0.53
SHROOM4-201ENST00000289292 PSMA5P28066 241 aa18.38■□□□□ 0.53
SHROOM4-201ENST00000289292 RRP9O43818 475 aaKnown RBP18.38■□□□□ 0.53
SHROOM4-201ENST00000289292 SKIDA1Q1XH10 827 aa18.38■□□□□ 0.53
SHROOM4-201ENST00000289292 HFM1A2PYH4 1435 aa18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 DHX16O60231 1041 aaKnown RBP18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 STK11IPQ8N1F8 1099 aa18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
SHROOM4-201ENST00000289292 ERICH2A1L162 156 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 RUFY1Q96T51 708 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 EHBP1L1Q8N3D4 1523 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 PSME1Q06323 249 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 EVA1CP58658 441 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 ATP2B1P20020 1258 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
SHROOM4-201ENST00000289292 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
SHROOM4-201ENST00000289292 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
SHROOM4-201ENST00000289292 SYCE3A1L190 88 aa18.35■□□□□ 0.53
SHROOM4-201ENST00000289292 PRM3Q9NNZ6 103 aa18.35■□□□□ 0.53
SHROOM4-201ENST00000289292 GNAI2P04899 355 aa18.35■□□□□ 0.53
SHROOM4-201ENST00000289292 KINO60870 393 aaKnown RBP18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 BRPF1P55201 1214 aaPredicted RBP18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 TMEM57Q8N5G2 664 aa18.34■□□□□ 0.53
SHROOM4-201ENST00000289292 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.53
SHROOM4-201ENST00000289292 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.53
SHROOM4-201ENST00000289292 CLASRPQ8N2M8 674 aaKnown RBP18.33■□□□□ 0.53
SHROOM4-201ENST00000289292 AK7Q96M32 723 aa18.33■□□□□ 0.53
SHROOM4-201ENST00000289292 TNMDQ9H2S6 317 aa18.33■□□□□ 0.53
SHROOM4-201ENST00000289292 VPS37DQ86XT2 251 aa18.33■□□□□ 0.52
SHROOM4-201ENST00000289292 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
SHROOM4-201ENST00000289292 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
SHROOM4-201ENST00000289292 SIL1Q9H173 461 aa18.33■□□□□ 0.52
SHROOM4-201ENST00000289292 CCDC47Q96A33 483 aaKnown RBP18.33■□□□□ 0.52
SHROOM4-201ENST00000289292 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
SHROOM4-201ENST00000289292 GNAI3P08754 354 aa18.32■□□□□ 0.52
SHROOM4-201ENST00000289292 MCM2P49736 904 aa18.32■□□□□ 0.52
SHROOM4-201ENST00000289292 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
SHROOM4-201ENST00000289292 LRRCC1Q9C099 1032 aa18.32■□□□□ 0.52
SHROOM4-201ENST00000289292 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
SHROOM4-201ENST00000289292 SUPT6HQ7KZ85 1726 aaKnown RBP18.31■□□□□ 0.52
SHROOM4-201ENST00000289292 CCDC192P0DO97 292 aa18.31■□□□□ 0.52
SHROOM4-201ENST00000289292 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
SHROOM4-201ENST00000289292 DAPK1P53355 1430 aa18.3■□□□□ 0.52
SHROOM4-201ENST00000289292 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
SHROOM4-201ENST00000289292 CWC15Q9P013 229 aaKnown RBP18.3■□□□□ 0.52
SHROOM4-201ENST00000289292 ERICH4A6NGS2 130 aa18.3■□□□□ 0.52
SHROOM4-201ENST00000289292 ACBD3Q9H3P7 528 aa18.29■□□□□ 0.52
SHROOM4-201ENST00000289292 CYP46A1Q9Y6A2 500 aa18.29■□□□□ 0.52
SHROOM4-201ENST00000289292 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
SHROOM4-201ENST00000289292 WDR33Q9C0J8 1336 aaKnown RBP18.29■□□□□ 0.52
SHROOM4-201ENST00000289292 CAMK4Q16566 473 aa18.28■□□□□ 0.52
SHROOM4-201ENST00000289292 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
SHROOM4-201ENST00000289292 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
SHROOM4-201ENST00000289292 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
SHROOM4-201ENST00000289292 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
SHROOM4-201ENST00000289292 STK38Q15208 465 aa18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 NLRP6P59044 892 aa18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 CCDC112Q8NEF3 446 aa18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.52
SHROOM4-201ENST00000289292 SSFA2P28290 1259 aa18.27■□□□□ 0.51
SHROOM4-201ENST00000289292 CABP1Q9NZU7 370 aa18.27■□□□□ 0.51
SHROOM4-201ENST00000289292 H0YHG0 523 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 SERPINC1P01008 464 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 THUMPD2Q9BTF0 503 aaKnown RBP18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 CBX1P83916 185 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 CDK19Q9BWU1 502 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 RRP12Q5JTH9 1297 aaKnown RBP18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 PCF11O94913 1555 aaKnown RBP18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
SHROOM4-201ENST00000289292 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 NAIPQ13075 1403 aa18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 ME1P48163 572 aa18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 FAM177BA6PVY3 158 aa18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 NUTM1Q86Y26 1132 aa18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 JAKMIP1Q96N16 626 aaKnown RBP18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
SHROOM4-201ENST00000289292 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
SHROOM4-201ENST00000289292 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms