RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
RAB11FIP1-201ENST00000287263 FAM193AP78312 1265 aa17.31■□□□□ 0.36
RAB11FIP1-201ENST00000287263 CCDC47Q96A33 483 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP1-201ENST00000287263 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
RAB11FIP1-201ENST00000287263 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
RAB11FIP1-201ENST00000287263 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP1-201ENST00000287263 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 SIL1Q9H173 461 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
RAB11FIP1-201ENST00000287263 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 GRPEL1Q9HAV7 217 aa17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 MYL6BP14649 208 aa17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
RAB11FIP1-201ENST00000287263 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 PDCL2Q8N4E4 241 aa17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 REC8O95072 547 aa17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 ERCC4Q92889 916 aaPredicted RBP17.28■□□□□ 0.36
RAB11FIP1-201ENST00000287263 ESPNB1AK53 854 aa17.27■□□□□ 0.36
RAB11FIP1-201ENST00000287263 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
RAB11FIP1-201ENST00000287263 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
RAB11FIP1-201ENST00000287263 EPS15P42566 896 aa17.27■□□□□ 0.36
RAB11FIP1-201ENST00000287263 ODF2Q5BJF6 829 aa17.27■□□□□ 0.36
RAB11FIP1-201ENST00000287263 SMC2O95347 1197 aa17.27■□□□□ 0.35
RAB11FIP1-201ENST00000287263 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.35
RAB11FIP1-201ENST00000287263 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.35
RAB11FIP1-201ENST00000287263 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
RAB11FIP1-201ENST00000287263 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
RAB11FIP1-201ENST00000287263 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
RAB11FIP1-201ENST00000287263 PAF1Q8N7H5 531 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 CCDC112Q8NEF3 446 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 NUCB2P80303 420 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
RAB11FIP1-201ENST00000287263 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
RAB11FIP1-201ENST00000287263 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
RAB11FIP1-201ENST00000287263 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
RAB11FIP1-201ENST00000287263 STK3Q13188 491 aa17.23■□□□□ 0.35
RAB11FIP1-201ENST00000287263 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
RAB11FIP1-201ENST00000287263 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
RAB11FIP1-201ENST00000287263 ERC2O15083 957 aa17.23■□□□□ 0.35
RAB11FIP1-201ENST00000287263 GNAI1P63096 354 aa17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 MTHFSP49914 203 aa17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
RAB11FIP1-201ENST00000287263 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
RAB11FIP1-201ENST00000287263 CFAP70Q5T0N1 1121 aa17.21■□□□□ 0.35
RAB11FIP1-201ENST00000287263 USP8P40818 1118 aa17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 HOOK1Q9UJC3 728 aaKnown RBP17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CABP4P57796 275 aa17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 GPRASP1Q5JY77 1395 aa17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 POLR3GO15318 223 aaPredicted RBP17.19■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 BRMS1Q9HCU9 246 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 TBC1D2BQ9UPU7 963 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 OFD1O75665 1012 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 GTF2F1P35269 517 aaKnown RBP eCLIP17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
RAB11FIP1-201ENST00000287263 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ROCK1Q13464 1354 aa17.17■□□□□ 0.34
RAB11FIP1-201ENST00000287263 PDCL3Q9H2J4 239 aa17.17■□□□□ 0.34
RAB11FIP1-201ENST00000287263 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■□□ 18.4
RAB11FIP1-201ENST00000287263 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 TAX1BP1Q86VP1 789 aa17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
RAB11FIP1-201ENST00000287263 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■□□□ 11.4
RAB11FIP1-201ENST00000287263 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
RAB11FIP1-201ENST00000287263 ENOX2Q16206 610 aaKnown RBP17.15■□□□□ 0.34
RAB11FIP1-201ENST00000287263 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.34
RAB11FIP1-201ENST00000287263 SRRTQ9BXP5 876 aaKnown RBP17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms