RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 FILIP1Q7Z7B0 1213 aa10.81□□□□□ -0.68
SMC2-201ENST00000286398 ZNF396Q96N95 335 aaPredicted RBP10.81□□□□□ -0.68
SMC2-201ENST00000286398 PDZRN3Q9UPQ7 1066 aa10.81□□□□□ -0.68
SMC2-201ENST00000286398 USP47Q96K76 1375 aa10.81□□□□□ -0.68
SMC2-201ENST00000286398 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
SMC2-201ENST00000286398 LUC7LQ9NQ29 371 aaKnown RBP10.81□□□□□ -0.68
SMC2-201ENST00000286398 DDX58O95786 925 aaKnown RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
SMC2-201ENST00000286398 COG3Q96JB2 828 aa10.8□□□□□ -0.68
SMC2-201ENST00000286398 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
SMC2-201ENST00000286398 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 DIAPH1O60610 1272 aaKnown RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
SMC2-201ENST00000286398 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 EZRP15311 586 aaKnown RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
SMC2-201ENST00000286398 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
SMC2-201ENST00000286398 NF2P35240 595 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 CNTROBQ8N137 903 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 NINLQ9Y2I6 1382 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 KIF3BO15066 747 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 IRX3P78415 501 aaPredicted RBP10.79□□□□□ -0.68
SMC2-201ENST00000286398 JMYQ8N9B5 988 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 K7ELQ4 463 aaPredicted RBP10.79□□□□□ -0.68
SMC2-201ENST00000286398 KRT85P78386 507 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 ANKRD18AQ8IVF6 992 aa10.79□□□□□ -0.68
SMC2-201ENST00000286398 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMC2-201ENST00000286398 GNAI1P63096 354 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 SHTN1A0MZ66 631 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 CLGNO14967 610 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 KDM4AO75164 1064 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 NEUROD6Q96NK8 337 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
SMC2-201ENST00000286398 VPS37DQ86XT2 251 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 FSD1Q9BTV5 496 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 TXLNAP40222 546 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
SMC2-201ENST00000286398 CBFA2T2O43439 604 aa10.77□□□□□ -0.68
SMC2-201ENST00000286398 IQCEQ6IPM2 695 aa10.77□□□□□ -0.68
SMC2-201ENST00000286398 ME1P48163 572 aa10.77□□□□□ -0.69
SMC2-201ENST00000286398 SYCP1Q15431 976 aa10.77□□□□□ -0.69
SMC2-201ENST00000286398 TTC5Q8N0Z6 440 aa10.77□□□□□ -0.69
SMC2-201ENST00000286398 GOLGA6L10A0A0M3HER8 536 aa10.77□□□□□ -0.69
SMC2-201ENST00000286398 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
SMC2-201ENST00000286398 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
SMC2-201ENST00000286398 KIF2AO00139 706 aaPredicted RBP10.77□□□□□ -0.69
SMC2-201ENST00000286398 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
SMC2-201ENST00000286398 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
SMC2-201ENST00000286398 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
SMC2-201ENST00000286398 TXLNBQ8N3L3 684 aa10.76□□□□□ -0.69
SMC2-201ENST00000286398 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
SMC2-201ENST00000286398 RBM33Q96EV2 1170 aaKnown RBP10.76□□□□□ -0.69
SMC2-201ENST00000286398 PTPN14Q15678 1187 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 EVC2Q86UK5 1308 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 SART3Q15020 963 aaKnown RBP10.75□□□□□ -0.69
SMC2-201ENST00000286398 ARHGAP29Q52LW3 1261 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
SMC2-201ENST00000286398 CUX2O14529 1486 aa10.75□□□□□ -0.69
SMC2-201ENST00000286398 POLR3GO15318 223 aaPredicted RBP10.74□□□□□ -0.69
SMC2-201ENST00000286398 SURF6O75683 361 aaKnown RBP10.74□□□□□ -0.69
SMC2-201ENST00000286398 CDK5RAP3Q96JB5 506 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMC2-201ENST00000286398 XPCQ01831 940 aaPredicted RBP10.74□□□□□ -0.69
SMC2-201ENST00000286398 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 TSPYL4Q9UJ04 414 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 UPF3BQ9BZI7 483 aaKnown RBP10.74□□□□□ -0.69
SMC2-201ENST00000286398 CCDC144AA2RUR9 1427 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 STIM1Q13586 685 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
SMC2-201ENST00000286398 DDX11Q96FC9 970 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 FAM107BQ9H098 131 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 CYP46A1Q9Y6A2 500 aa10.74□□□□□ -0.69
SMC2-201ENST00000286398 SYCE3A1L190 88 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
SMC2-201ENST00000286398 PDE3AQ14432 1141 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 GCC1Q96CN9 775 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 GNAI3P08754 354 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
SMC2-201ENST00000286398 CCDC7Q96M83 1385 aa10.72□□□□□ -0.69
SMC2-201ENST00000286398 HNRNPMP52272 730 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMC2-201ENST00000286398 MAP2K1Q02750 393 aaPredicted RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 HIP1O00291 1037 aa10.72□□□□□ -0.69
SMC2-201ENST00000286398 RNF187Q5TA31 235 aaPredicted RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 SPATA32Q96LK8 384 aa10.72□□□□□ -0.69
SMC2-201ENST00000286398 URI1O94763 535 aaPredicted RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
SMC2-201ENST00000286398 SFPQP23246 707 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMC2-201ENST00000286398 FYB1O15117 783 aa10.72□□□□□ -0.69
SMC2-201ENST00000286398 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
SMC2-201ENST00000286398 MAP9Q49MG5 647 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 CEP63Q96MT8 703 aa10.71□□□□□ -0.69
SMC2-201ENST00000286398 SLC26A8Q96RN1 970 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms