RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 CCDC192P0DO97 292 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC73Q6ZRK6 1079 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
PTPRO-201ENST00000281171 INTS3Q68E01 1043 aaKnown RBP17.1■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 RASSF4Q9H2L5 321 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 MPNDQ8N594 471 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPRO-201ENST00000281171 NF2P35240 595 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 GNAI1P63096 354 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
PTPRO-201ENST00000281171 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
PTPRO-201ENST00000281171 TICAM2Q86XR7 235 aa17.09■□□□□ 0.33
PTPRO-201ENST00000281171 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
PTPRO-201ENST00000281171 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
PTPRO-201ENST00000281171 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.33
PTPRO-201ENST00000281171 HECW1Q76N89 1606 aa17.08■□□□□ 0.33
PTPRO-201ENST00000281171 POLR3GO15318 223 aaPredicted RBP17.08■□□□□ 0.33
PTPRO-201ENST00000281171 IVLP07476 585 aa17.08■□□□□ 0.33
PTPRO-201ENST00000281171 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.33
PTPRO-201ENST00000281171 GBP3Q9H0R5 595 aa17.08■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.33
PTPRO-201ENST00000281171 FAM193AP78312 1265 aa17.08■□□□□ 0.32
PTPRO-201ENST00000281171 RABEP1Q15276 862 aa17.08■□□□□ 0.32
PTPRO-201ENST00000281171 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 SARNPP82979 210 aaKnown RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 FEZ1Q99689 392 aa17.07■□□□□ 0.32
PTPRO-201ENST00000281171 TTC31Q49AM3 519 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
PTPRO-201ENST00000281171 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
PTPRO-201ENST00000281171 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-201ENST00000281171 GOLGA6L10A6NI86 522 aa17.06■□□□□ 0.32
PTPRO-201ENST00000281171 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
PTPRO-201ENST00000281171 MCM2P49736 904 aa17.06■□□□□ 0.32
PTPRO-201ENST00000281171 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
PTPRO-201ENST00000281171 TERF1P54274 439 aa17.06■□□□□ 0.32
PTPRO-201ENST00000281171 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
PTPRO-201ENST00000281171 G3V3G9 751 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-201ENST00000281171 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 MICALCLQ6ZW33 695 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTPRO-201ENST00000281171 CDC45O75419 566 aa17.05■□□□□ 0.32
PTPRO-201ENST00000281171 RRAGDQ9NQL2 400 aaPredicted RBP17.05■□□□□ 0.32
PTPRO-201ENST00000281171 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
PTPRO-201ENST00000281171 SLC26A8Q96RN1 970 aa17.04■□□□□ 0.32
PTPRO-201ENST00000281171 OGFRQ9NZT2 677 aa17.04■□□□□ 0.32
PTPRO-201ENST00000281171 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
PTPRO-201ENST00000281171 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
PTPRO-201ENST00000281171 AKNAQ7Z591 1439 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 BANK1Q8NDB2 785 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
PTPRO-201ENST00000281171 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 PDILTQ8N807 584 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 SMC2O95347 1197 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 HS1BP3Q53T59 392 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
PTPRO-201ENST00000281171 MYO6Q9UM54 1294 aa17.02■□□□□ 0.32
PTPRO-201ENST00000281171 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
PTPRO-201ENST00000281171 RILPL2Q969X0 211 aa17.02■□□□□ 0.32
PTPRO-201ENST00000281171 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
PTPRO-201ENST00000281171 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
PTPRO-201ENST00000281171 EVA1CP58658 441 aa17.02■□□□□ 0.31
PTPRO-201ENST00000281171 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.31
PTPRO-201ENST00000281171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.02■□□□□ 0.31
PTPRO-201ENST00000281171 LMAN1P49257 510 aa17.01■□□□□ 0.31
PTPRO-201ENST00000281171 PRG4Q92954 1404 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-201ENST00000281171 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-201ENST00000281171 RASSF8Q8NHQ8 419 aa17.01■□□□□ 0.31
PTPRO-201ENST00000281171 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
PTPRO-201ENST00000281171 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
PTPRO-201ENST00000281171 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-201ENST00000281171 LTV1Q96GA3 475 aaPredicted RBP17.01■□□□□ 0.31
PTPRO-201ENST00000281171 A0A1B0GUL7 405 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 PAXBP1Q9Y5B6 917 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.31
PTPRO-201ENST00000281171 IBSPP21815 317 aaPredicted RBP17■□□□□ 0.31
PTPRO-201ENST00000281171 SYCE3A1L190 88 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 PSME1Q06323 249 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 GABPB1Q06547 395 aaPredicted RBP17■□□□□ 0.31
PTPRO-201ENST00000281171 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
PTPRO-201ENST00000281171 CPSF2Q9P2I0 782 aaKnown RBP17■□□□□ 0.31
PTPRO-201ENST00000281171 OLFM4Q6UX06 510 aa16.99■□□□□ 0.31
PTPRO-201ENST00000281171 MYCBPQ99417 103 aaPredicted RBP16.99■□□□□ 0.31
PTPRO-201ENST00000281171 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
PTPRO-201ENST00000281171 APAF1O14727 1248 aa16.98■□□□□ 0.31
PTPRO-201ENST00000281171 RIPK4P57078 832 aa16.98■□□□□ 0.31
PTPRO-201ENST00000281171 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms