RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 TERF2IPQ9NYB0 399 aa31.7■■■□□ 2.67
C1orf35-201ENST00000272139 XPCQ01831 940 aaPredicted RBP31.69■■■□□ 2.66
C1orf35-201ENST00000272139 CCDC7Q96M83 1385 aa31.68■■■□□ 2.66
C1orf35-201ENST00000272139 WASHC2AQ641Q2 1341 aa31.68■■■□□ 2.66
C1orf35-201ENST00000272139 HDGFL2Q7Z4V5 671 aaPredicted RBP31.68■■■□□ 2.66
C1orf35-201ENST00000272139 MYOM1P52179 1685 aa31.68■■■□□ 2.66
C1orf35-201ENST00000272139 AKAP12Q02952 1782 aa31.67■■■□□ 2.66
C1orf35-201ENST00000272139 CPSF1Q10570 1443 aaKnown RBP31.64■■■□□ 2.66
C1orf35-201ENST00000272139 KTN1Q86UP2 1357 aaKnown RBP31.63■■■□□ 2.65
C1orf35-201ENST00000272139 CD163L1Q9NR16 1453 aa31.63■■■□□ 2.65
C1orf35-201ENST00000272139 C8orf37Q96NL8 207 aa31.62■■■□□ 2.65
C1orf35-201ENST00000272139 AFF2P51816 1311 aa31.61■■■□□ 2.65
C1orf35-201ENST00000272139 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
C1orf35-201ENST00000272139 ANKRD36BQ8N2N9 1353 aa31.61■■■□□ 2.65
C1orf35-201ENST00000272139 SPATA31A3Q5VYP0 1347 aa31.61■■■□□ 2.65
C1orf35-201ENST00000272139 A0A1W2PP64 1363 aa31.6■■■□□ 2.65
C1orf35-201ENST00000272139 USP6P35125 1406 aa31.6■■■□□ 2.65
C1orf35-201ENST00000272139 ADAMTS2O95450 1211 aa31.59■■■□□ 2.65
C1orf35-201ENST00000272139 MON2Q7Z3U7 1717 aa31.59■■■□□ 2.65
C1orf35-201ENST00000272139 SBNO1A3KN83 1393 aa31.58■■■□□ 2.65
C1orf35-201ENST00000272139 BRD4O60885 1362 aaPredicted RBP31.58■■■□□ 2.65
C1orf35-201ENST00000272139 ZNF316A6NFI3 1004 aaPredicted RBP31.58■■■□□ 2.65
C1orf35-201ENST00000272139 TNS3Q68CZ2 1445 aa31.57■■■□□ 2.65
C1orf35-201ENST00000272139 TRPM3Q9HCF6 1732 aaPredicted RBP31.57■■■□□ 2.64
C1orf35-201ENST00000272139 NGLY1Q96IV0 654 aa31.56■■■□□ 2.64
C1orf35-201ENST00000272139 LMOD2Q6P5Q4 547 aa31.55■■■□□ 2.64
C1orf35-201ENST00000272139 PANK3Q9H999 370 aa31.55■■■□□ 2.64
C1orf35-201ENST00000272139 TTC21BQ7Z4L5 1316 aa31.52■■■□□ 2.64
C1orf35-201ENST00000272139 ARHGEF10O15013 1369 aa31.52■■■□□ 2.64
C1orf35-201ENST00000272139 EDC4Q6P2E9 1401 aaKnown RBP31.52■■■□□ 2.64
C1orf35-201ENST00000272139 SSH2Q76I76 1423 aa31.51■■■□□ 2.63
C1orf35-201ENST00000272139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.5■■■□□ 2.63
C1orf35-201ENST00000272139 RXRBP28702 533 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 ABTB2Q8N961 1025 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 CARD14Q9BXL6 1004 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 TTC21AQ8NDW8 1320 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 NRKQ7Z2Y5 1582 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 ALS2Q96Q42 1657 aa31.49■■■□□ 2.63
C1orf35-201ENST00000272139 MARF1Q9Y4F3 1742 aaKnown RBP31.49■■■□□ 2.63
C1orf35-201ENST00000272139 FNBP4Q8N3X1 1017 aaPredicted RBP31.46■■■□□ 2.63
C1orf35-201ENST00000272139 CDK12Q9NYV4 1490 aaPredicted RBP31.45■■■□□ 2.63
C1orf35-201ENST00000272139 QTRT2Q9H974 415 aaKnown RBP31.45■■■□□ 2.63
C1orf35-201ENST00000272139 USP21Q9UK80 565 aa31.45■■■□□ 2.63
C1orf35-201ENST00000272139 NSD3Q9BZ95 1437 aa31.45■■■□□ 2.62
C1orf35-201ENST00000272139 HAP1P54257 671 aaPredicted RBP31.43■■■□□ 2.62
C1orf35-201ENST00000272139 NUTM2GQ5VZR2 741 aa31.43■■■□□ 2.62
C1orf35-201ENST00000272139 NLRP6P59044 892 aa31.41■■■□□ 2.62
C1orf35-201ENST00000272139 NLRP13Q86W25 1043 aa31.41■■■□□ 2.62
C1orf35-201ENST00000272139 KNSTRNQ9Y448 316 aa31.41■■■□□ 2.62
C1orf35-201ENST00000272139 RBM6P78332 1123 aaKnown RBP31.41■■■□□ 2.62
C1orf35-201ENST00000272139 DDX10Q13206 875 aaKnown RBP31.41■■■□□ 2.62
C1orf35-201ENST00000272139 NME9Q86XW9 330 aa31.41■■■□□ 2.62
C1orf35-201ENST00000272139 PIK3C2AO00443 1686 aa31.4■■■□□ 2.62
C1orf35-201ENST00000272139 PLEKHG5O94827 1062 aa31.4■■■□□ 2.62
C1orf35-201ENST00000272139 TRPC5Q9UL62 973 aaPredicted RBP31.4■■■□□ 2.62
C1orf35-201ENST00000272139 CGNL1Q0VF96 1302 aa31.39■■■□□ 2.62
C1orf35-201ENST00000272139 KIF20BQ96Q89 1820 aa31.37■■■□□ 2.61
C1orf35-201ENST00000272139 ABCA3Q99758 1704 aa31.37■■■□□ 2.61
C1orf35-201ENST00000272139 FYB1O15117 783 aa31.36■■■□□ 2.61
C1orf35-201ENST00000272139 PER1O15534 1290 aaPredicted RBP31.35■■■□□ 2.61
C1orf35-201ENST00000272139 CABLES1Q8TDN4 633 aa31.34■■■□□ 2.61
C1orf35-201ENST00000272139 ZRANB1Q9UGI0 708 aa31.34■■■□□ 2.61
C1orf35-201ENST00000272139 ATRNO75882 1429 aa31.34■■■□□ 2.61
C1orf35-201ENST00000272139 BCL9LQ86UU0 1499 aa31.34■■■□□ 2.61
C1orf35-201ENST00000272139 USP31Q70CQ4 1352 aa31.33■■■□□ 2.61
C1orf35-201ENST00000272139 COG3Q96JB2 828 aa31.32■■■□□ 2.61
C1orf35-201ENST00000272139 GGNBP2Q9H3C7 697 aa31.32■■■□□ 2.61
C1orf35-201ENST00000272139 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.31■■■□□ 2.6
C1orf35-201ENST00000272139 SLIT2O94813 1529 aa31.31■■■□□ 2.6
C1orf35-201ENST00000272139 USP54Q70EL1 1684 aa31.29■■■□□ 2.6
C1orf35-201ENST00000272139 USP19O94966 1318 aa31.29■■■□□ 2.6
C1orf35-201ENST00000272139 RGS12O14924 1447 aa31.29■■■□□ 2.6
C1orf35-201ENST00000272139 CRYBG1Q9Y4K1 1723 aa31.28■■■□□ 2.6
C1orf35-201ENST00000272139 UNC5CLQ8IV45 518 aa31.27■■■□□ 2.6
C1orf35-201ENST00000272139 GCP02774 474 aa31.26■■■□□ 2.6
C1orf35-201ENST00000272139 AMER1Q5JTC6 1135 aaPredicted RBP31.26■■■□□ 2.6
C1orf35-201ENST00000272139 PHRF1Q9P1Y6 1649 aaKnown RBP31.26■■■□□ 2.59
C1orf35-201ENST00000272139 OVOS2A0A0J9YW53 1432 aa31.25■■■□□ 2.59
C1orf35-201ENST00000272139 OVOS2Q6IE36 1432 aa31.25■■■□□ 2.59
C1orf35-201ENST00000272139 NSD2O96028 1365 aa31.25■■■□□ 2.59
C1orf35-201ENST00000272139 KCNH5Q8NCM2 988 aa31.25■■■□□ 2.59
C1orf35-201ENST00000272139 NWD2Q9ULI1 1742 aa31.25■■■□□ 2.59
C1orf35-201ENST00000272139 ANKRD26Q9UPS8 1709 aa31.24■■■□□ 2.59
C1orf35-201ENST00000272139 PLCH1Q4KWH8 1693 aa31.24■■■□□ 2.59
C1orf35-201ENST00000272139 SOX12O15370 315 aa31.23■■■□□ 2.59
C1orf35-201ENST00000272139 SLIT3O75094 1523 aa31.22■■■□□ 2.59
C1orf35-201ENST00000272139 CC2D1BQ5T0F9 858 aaKnown RBP31.22■■■□□ 2.59
C1orf35-201ENST00000272139 GJD4Q96KN9 370 aaPredicted RBP31.21■■■□□ 2.59
C1orf35-201ENST00000272139 CNGB1Q14028 1251 aaPredicted RBP31.2■■■□□ 2.59
C1orf35-201ENST00000272139 NPC1L1Q9UHC9 1359 aa31.2■■■□□ 2.58
C1orf35-201ENST00000272139 ZC3H6P61129 1189 aaKnown RBP31.19■■■□□ 2.58
C1orf35-201ENST00000272139 MORC1Q86VD1 984 aa31.19■■■□□ 2.58
C1orf35-201ENST00000272139 COL14A1Q05707 1796 aaKnown RBP31.18■■■□□ 2.58
C1orf35-201ENST00000272139 FAM83GA6ND36 823 aa31.18■■■□□ 2.58
C1orf35-201ENST00000272139 VPS72Q15906 364 aa31.15■■■□□ 2.58
C1orf35-201ENST00000272139 PRDM11Q9NQV5 511 aa31.14■■■□□ 2.58
C1orf35-201ENST00000272139 KIAA0232Q92628 1395 aa31.13■■■□□ 2.57
C1orf35-201ENST00000272139 ZBTB7CA1YPR0 619 aa31.13■■■□□ 2.57
C1orf35-201ENST00000272139 TNNT2P45379 298 aaPredicted RBP31.13■■■□□ 2.57
C1orf35-201ENST00000272139 NFAT5O94916 1531 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms