RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 RGPD8O14715 1765 aaPredicted RBP27.29■■□□□ 1.96
LYSMD2-201ENST00000267838 ANKARQ7Z5J8 1434 aa27.29■■□□□ 1.96
LYSMD2-201ENST00000267838 NME9Q86XW9 330 aa27.28■■□□□ 1.96
LYSMD2-201ENST00000267838 CCDC146Q8IYE0 955 aa27.27■■□□□ 1.96
LYSMD2-201ENST00000267838 NWD1Q149M9 1564 aa27.27■■□□□ 1.96
LYSMD2-201ENST00000267838 USP6P35125 1406 aa27.26■■□□□ 1.95
LYSMD2-201ENST00000267838 COL3A1P02461 1466 aaPredicted RBP27.24■■□□□ 1.95
LYSMD2-201ENST00000267838 TTC21BQ7Z4L5 1316 aa27.23■■□□□ 1.95
LYSMD2-201ENST00000267838 COG3Q96JB2 828 aa27.22■■□□□ 1.95
LYSMD2-201ENST00000267838 ZRANB1Q9UGI0 708 aa27.22■■□□□ 1.95
LYSMD2-201ENST00000267838 ADGRL3Q9HAR2 1447 aa27.21■■□□□ 1.95
LYSMD2-201ENST00000267838 PMFBP1Q8TBY8 1022 aa27.21■■□□□ 1.95
LYSMD2-201ENST00000267838 MAP2P11137 1827 aaKnown RBP27.2■■□□□ 1.94
LYSMD2-201ENST00000267838 PNPLA6Q8IY17 1366 aa27.2■■□□□ 1.94
LYSMD2-201ENST00000267838 SSH2Q76I76 1423 aa27.19■■□□□ 1.94
LYSMD2-201ENST00000267838 APAF1O14727 1248 aa27.19■■□□□ 1.94
LYSMD2-201ENST00000267838 AATKQ6ZMQ8 1374 aa27.18■■□□□ 1.94
LYSMD2-201ENST00000267838 NGDNQ8NEJ9 315 aaKnown RBP27.18■■□□□ 1.94
LYSMD2-201ENST00000267838 RBM33Q96EV2 1170 aaKnown RBP27.18■■□□□ 1.94
LYSMD2-201ENST00000267838 POLKQ9UBT6 870 aa27.18■■□□□ 1.94
LYSMD2-201ENST00000267838 CDCA7LQ96GN5 454 aa27.17■■□□□ 1.94
LYSMD2-201ENST00000267838 ZNF521Q96K83 1311 aa27.16■■□□□ 1.94
LYSMD2-201ENST00000267838 NGEFQ8N5V2 710 aa27.16■■□□□ 1.94
LYSMD2-201ENST00000267838 RUNDC1Q96C34 613 aa27.16■■□□□ 1.94
LYSMD2-201ENST00000267838 FBLN1P23142 703 aa27.15■■□□□ 1.94
LYSMD2-201ENST00000267838 U2AF1L5P0DN76 240 aaPredicted RBP27.14■■□□□ 1.94
LYSMD2-201ENST00000267838 U2AF1Q01081 240 aaKnown RBP eCLIP27.14■■□□□ 1.94
LYSMD2-201ENST00000267838 TTC21AQ8NDW8 1320 aa27.14■■□□□ 1.94
LYSMD2-201ENST00000267838 OVOS2A0A0J9YW53 1432 aa27.14■■□□□ 1.94
LYSMD2-201ENST00000267838 OVOS2Q6IE36 1432 aa27.14■■□□□ 1.94
LYSMD2-201ENST00000267838 DIAPH1O60610 1272 aaKnown RBP27.13■■□□□ 1.93
LYSMD2-201ENST00000267838 HSPA2P54652 639 aa27.12■■□□□ 1.93
LYSMD2-201ENST00000267838 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
LYSMD2-201ENST00000267838 C14orf37Q86TY3 774 aa27.11■■□□□ 1.93
LYSMD2-201ENST00000267838 CDK12Q9NYV4 1490 aaPredicted RBP27.1■■□□□ 1.93
LYSMD2-201ENST00000267838 U2SURPO15042 1029 aaKnown RBP27.1■■□□□ 1.93
LYSMD2-201ENST00000267838 PPM1GO15355 546 aaPredicted RBP27.1■■□□□ 1.93
LYSMD2-201ENST00000267838 PROSER2Q86WR7 435 aaPredicted RBP27.1■■□□□ 1.93
LYSMD2-201ENST00000267838 EMILIN1Q9Y6C2 1016 aa27.1■■□□□ 1.93
LYSMD2-201ENST00000267838 LMTK3Q96Q04 1460 aa27.09■■□□□ 1.93
LYSMD2-201ENST00000267838 GOLGA2Q08379 1002 aa27.09■■□□□ 1.93
LYSMD2-201ENST00000267838 PHF8Q9UPP1 1060 aa27.07■■□□□ 1.92
LYSMD2-201ENST00000267838 RNF123Q5XPI4 1314 aa27.07■■□□□ 1.92
LYSMD2-201ENST00000267838 IRX6P78412 446 aaPredicted RBP27.07■■□□□ 1.92
LYSMD2-201ENST00000267838 ERICH6BQ5W0A0 696 aa27.07■■□□□ 1.92
LYSMD2-201ENST00000267838 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
LYSMD2-201ENST00000267838 USP31Q70CQ4 1352 aa27.06■■□□□ 1.92
LYSMD2-201ENST00000267838 PIK3C2AO00443 1686 aa27.06■■□□□ 1.92
LYSMD2-201ENST00000267838 RRS1Q15050 365 aaKnown RBP27.05■■□□□ 1.92
LYSMD2-201ENST00000267838 STRCP1A6NGW2 1772 aa27.05■■□□□ 1.92
LYSMD2-201ENST00000267838 RCAN3Q9UKA8 241 aa27.02■■□□□ 1.92
LYSMD2-201ENST00000267838 SLFN5Q08AF3 891 aa27.02■■□□□ 1.92
LYSMD2-201ENST00000267838 PLEKHF1Q96S99 279 aa27.02■■□□□ 1.92
LYSMD2-201ENST00000267838 NCBP3Q53F19 620 aaKnown RBP27.01■■□□□ 1.91
LYSMD2-201ENST00000267838 ESCO1Q5FWF5 840 aa27.01■■□□□ 1.91
LYSMD2-201ENST00000267838 DUSP27Q5VZP5 1158 aa27.01■■□□□ 1.91
LYSMD2-201ENST00000267838 WWC1Q8IX03 1113 aa27.01■■□□□ 1.91
LYSMD2-201ENST00000267838 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.91
LYSMD2-201ENST00000267838 PNNQ9H307 717 aaKnown RBP27■■□□□ 1.91
LYSMD2-201ENST00000267838 STRCQ7RTU9 1775 aa27■■□□□ 1.91
LYSMD2-201ENST00000267838 USP54Q70EL1 1684 aa27■■□□□ 1.91
LYSMD2-201ENST00000267838 IL13P35225 146 aa26.99■■□□□ 1.91
LYSMD2-201ENST00000267838 NEUROD2Q15784 382 aa26.99■■□□□ 1.91
LYSMD2-201ENST00000267838 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
LYSMD2-201ENST00000267838 C19orf44Q9H6X5 657 aa26.99■■□□□ 1.91
LYSMD2-201ENST00000267838 CCDC27Q2M243 656 aa26.98■■□□□ 1.91
LYSMD2-201ENST00000267838 TRMT2AQ8IZ69 625 aaKnown RBP26.98■■□□□ 1.91
LYSMD2-201ENST00000267838 FCHSD2O94868 740 aa26.97■■□□□ 1.91
LYSMD2-201ENST00000267838 MAPK8IP3Q9UPT6 1336 aa26.97■■□□□ 1.91
LYSMD2-201ENST00000267838 NCOA3Q9Y6Q9 1424 aa26.97■■□□□ 1.91
LYSMD2-201ENST00000267838 MARF1Q9Y4F3 1742 aaKnown RBP26.97■■□□□ 1.91
LYSMD2-201ENST00000267838 E9PSI1 815 aa26.97■■□□□ 1.91
LYSMD2-201ENST00000267838 LRRC7Q96NW7 1537 aa26.96■■□□□ 1.91
LYSMD2-201ENST00000267838 TMEM94Q12767 1356 aa26.96■■□□□ 1.91
LYSMD2-201ENST00000267838 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
LYSMD2-201ENST00000267838 SPINK5Q9NQ38 1064 aaPredicted RBP26.96■■□□□ 1.91
LYSMD2-201ENST00000267838 NLRP6P59044 892 aa26.95■■□□□ 1.9
LYSMD2-201ENST00000267838 DMRT2Q9Y5R5 561 aa26.95■■□□□ 1.9
LYSMD2-201ENST00000267838 PAK3O75914 559 aaPredicted RBP26.94■■□□□ 1.9
LYSMD2-201ENST00000267838 RSPH6AQ9H0K4 717 aa26.94■■□□□ 1.9
LYSMD2-201ENST00000267838 ABTB2Q8N961 1025 aa26.93■■□□□ 1.9
LYSMD2-201ENST00000267838 ORAI2Q96SN7 254 aa26.93■■□□□ 1.9
LYSMD2-201ENST00000267838 SOX12O15370 315 aa26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 PSME1Q06323 249 aa26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 WDR63Q8IWG1 891 aa26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 C1orf167Q5SNV9 1468 aa26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 TMPOP42166 694 aaKnown RBP26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 RRP1P56182 461 aaKnown RBP26.92■■□□□ 1.9
LYSMD2-201ENST00000267838 DCCP43146 1447 aa26.91■■□□□ 1.9
LYSMD2-201ENST00000267838 KIF1AQ12756 1690 aa26.91■■□□□ 1.9
LYSMD2-201ENST00000267838 PRKAR2BP31323 418 aa26.9■■□□□ 1.9
LYSMD2-201ENST00000267838 MAP3K19Q56UN5 1328 aa26.89■■□□□ 1.9
LYSMD2-201ENST00000267838 NUTM2GQ5VZR2 741 aa26.89■■□□□ 1.9
LYSMD2-201ENST00000267838 HMOX1P09601 288 aa26.89■■□□□ 1.89
LYSMD2-201ENST00000267838 SBNO1A3KN83 1393 aa26.88■■□□□ 1.89
LYSMD2-201ENST00000267838 ATF3P18847 181 aa26.88■■□□□ 1.89
LYSMD2-201ENST00000267838 EIF4A2Q14240 407 aaKnown RBP26.88■■□□□ 1.89
LYSMD2-201ENST00000267838 NEFMP07197 916 aa26.87■■□□□ 1.89
LYSMD2-201ENST00000267838 MST1RQ04912 1400 aa26.86■■□□□ 1.89
LYSMD2-201ENST00000267838 FLT4P35916 1363 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms