RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
SGCE-201ENST00000265735 AKAP12Q02952 1782 aa17.69■□□□□ 0.42
SGCE-201ENST00000265735 POTEAQ6S8J7 498 aa17.68■□□□□ 0.42
SGCE-201ENST00000265735 USP6P35125 1406 aa17.68■□□□□ 0.42
SGCE-201ENST00000265735 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
SGCE-201ENST00000265735 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
SGCE-201ENST00000265735 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
SGCE-201ENST00000265735 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
SGCE-201ENST00000265735 SSH2Q76I76 1423 aa17.67■□□□□ 0.42
SGCE-201ENST00000265735 ZNF772Q68DY9 489 aaPredicted RBP17.67■□□□□ 0.42
SGCE-201ENST00000265735 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
SGCE-201ENST00000265735 AFF2P51816 1311 aa17.67■□□□□ 0.42
SGCE-201ENST00000265735 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
SGCE-201ENST00000265735 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
SGCE-201ENST00000265735 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
SGCE-201ENST00000265735 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
SGCE-201ENST00000265735 MON2Q7Z3U7 1717 aa17.64■□□□□ 0.41
SGCE-201ENST00000265735 TMF1P82094 1093 aa17.64■□□□□ 0.41
SGCE-201ENST00000265735 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
SGCE-201ENST00000265735 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
SGCE-201ENST00000265735 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
SGCE-201ENST00000265735 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
SGCE-201ENST00000265735 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
SGCE-201ENST00000265735 SLIT2O94813 1529 aa17.61■□□□□ 0.41
SGCE-201ENST00000265735 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
SGCE-201ENST00000265735 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
SGCE-201ENST00000265735 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
SGCE-201ENST00000265735 PIK3C2AO00443 1686 aa17.6■□□□□ 0.41
SGCE-201ENST00000265735 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
SGCE-201ENST00000265735 USP19O94966 1318 aa17.59■□□□□ 0.41
SGCE-201ENST00000265735 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
SGCE-201ENST00000265735 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.59■□□□□ 0.41
SGCE-201ENST00000265735 PLEKHG5O94827 1062 aa17.59■□□□□ 0.41
SGCE-201ENST00000265735 TMC1Q8TDI8 760 aa17.59■□□□□ 0.41
SGCE-201ENST00000265735 USP21Q9UK80 565 aa17.59■□□□□ 0.41
SGCE-201ENST00000265735 CDCA8Q53HL2 280 aa17.58■□□□□ 0.41
SGCE-201ENST00000265735 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.41
SGCE-201ENST00000265735 NLRP13Q86W25 1043 aa17.58■□□□□ 0.41
SGCE-201ENST00000265735 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
SGCE-201ENST00000265735 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.4
SGCE-201ENST00000265735 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
SGCE-201ENST00000265735 FAM83GA6ND36 823 aa17.58■□□□□ 0.4
SGCE-201ENST00000265735 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
SGCE-201ENST00000265735 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
SGCE-201ENST00000265735 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
SGCE-201ENST00000265735 A0A1W2PP64 1363 aa17.57■□□□□ 0.4
SGCE-201ENST00000265735 ATRNO75882 1429 aa17.56■□□□□ 0.4
SGCE-201ENST00000265735 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
SGCE-201ENST00000265735 HDGFL2Q7Z4V5 671 aaPredicted RBP17.56■□□□□ 0.4
SGCE-201ENST00000265735 NLRP6P59044 892 aa17.55■□□□□ 0.4
SGCE-201ENST00000265735 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
SGCE-201ENST00000265735 SLIT3O75094 1523 aa17.55■□□□□ 0.4
SGCE-201ENST00000265735 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
SGCE-201ENST00000265735 RXRBP28702 533 aa17.55■□□□□ 0.4
SGCE-201ENST00000265735 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
SGCE-201ENST00000265735 USP54Q70EL1 1684 aa17.54■□□□□ 0.4
SGCE-201ENST00000265735 MYOM1P52179 1685 aa17.54■□□□□ 0.4
SGCE-201ENST00000265735 GCP02774 474 aa17.54■□□□□ 0.4
SGCE-201ENST00000265735 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
SGCE-201ENST00000265735 CPDO75976 1380 aa17.53■□□□□ 0.4
SGCE-201ENST00000265735 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
SGCE-201ENST00000265735 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
SGCE-201ENST00000265735 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
SGCE-201ENST00000265735 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
SGCE-201ENST00000265735 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
SGCE-201ENST00000265735 SOCS7O14512 581 aa17.52■□□□□ 0.39
SGCE-201ENST00000265735 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
SGCE-201ENST00000265735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.397e-6■■□□□ 11.5
SGCE-201ENST00000265735 PRDM11Q9NQV5 511 aa17.51■□□□□ 0.39
SGCE-201ENST00000265735 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
SGCE-201ENST00000265735 GJD4Q96KN9 370 aaPredicted RBP17.49■□□□□ 0.39
SGCE-201ENST00000265735 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
SGCE-201ENST00000265735 VPS72Q15906 364 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 NME9Q86XW9 330 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 MIER1Q8N108 512 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 CHRNA2Q15822 529 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 GLI3P10071 1580 aa17.48■□□□□ 0.39
SGCE-201ENST00000265735 NFAT5O94916 1531 aa17.47■□□□□ 0.39
SGCE-201ENST00000265735 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
SGCE-201ENST00000265735 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
SGCE-201ENST00000265735 RGS12O14924 1447 aa17.46■□□□□ 0.39
SGCE-201ENST00000265735 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
SGCE-201ENST00000265735 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
SGCE-201ENST00000265735 COL18A1P39060 1754 aa17.46■□□□□ 0.39
SGCE-201ENST00000265735 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
SGCE-201ENST00000265735 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
SGCE-201ENST00000265735 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
SGCE-201ENST00000265735 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
SGCE-201ENST00000265735 FYB1O15117 783 aa17.42■□□□□ 0.38
SGCE-201ENST00000265735 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
SGCE-201ENST00000265735 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
SGCE-201ENST00000265735 ABCC6O95255 1503 aa17.41■□□□□ 0.38
SGCE-201ENST00000265735 KIF20BQ96Q89 1820 aa17.41■□□□□ 0.38
SGCE-201ENST00000265735 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
SGCE-201ENST00000265735 LTN1O94822 1766 aa17.4■□□□□ 0.38
SGCE-201ENST00000265735 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
SGCE-201ENST00000265735 SOX12O15370 315 aa17.39■□□□□ 0.37
SGCE-201ENST00000265735 COG3Q96JB2 828 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms