RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CCDC158Q5M9N0 1113 aa19.1■□□□□ 0.65
SHANK3-201ENST00000262795 ERC2O15083 957 aa19.1■□□□□ 0.65
SHANK3-201ENST00000262795 RAI14Q9P0K7 980 aa19.1■□□□□ 0.65
SHANK3-201ENST00000262795 ZNF76P36508 570 aa19.1■□□□□ 0.65
SHANK3-201ENST00000262795 E9PSI1 815 aa19.1■□□□□ 0.65
SHANK3-201ENST00000262795 TRMT1LQ7Z2T5 733 aaKnown RBP19.1■□□□□ 0.65
SHANK3-201ENST00000262795 XBP1P17861 261 aa19.09■□□□□ 0.65
SHANK3-201ENST00000262795 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
SHANK3-201ENST00000262795 SLC4A8Q2Y0W8 1093 aa19.09■□□□□ 0.65
SHANK3-201ENST00000262795 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
SHANK3-201ENST00000262795 HOOK1Q9UJC3 728 aaKnown RBP19.09■□□□□ 0.65
SHANK3-201ENST00000262795 GSE1Q14687 1217 aa19.09■□□□□ 0.65
SHANK3-201ENST00000262795 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
SHANK3-201ENST00000262795 RRS1Q15050 365 aaKnown RBP19.08■□□□□ 0.64
SHANK3-201ENST00000262795 CCDC57Q2TAC2 916 aa19.08■□□□□ 0.64
SHANK3-201ENST00000262795 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
SHANK3-201ENST00000262795 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
SHANK3-201ENST00000262795 RPGRQ92834 1020 aaKnown RBP19.07■□□□□ 0.64
SHANK3-201ENST00000262795 CRBNQ96SW2 442 aa19.07■□□□□ 0.64
SHANK3-201ENST00000262795 CRACR2BQ8N4Y2 399 aaPredicted RBP19.07■□□□□ 0.64
SHANK3-201ENST00000262795 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
SHANK3-201ENST00000262795 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
SHANK3-201ENST00000262795 CCDC30Q5VVM6 783 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 USHBP1Q8N6Y0 703 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 C1orf115Q9H7X2 142 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 AK7Q96M32 723 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 BTBD11A6QL63 1104 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 ABCF2Q9UG63 623 aa19.06■□□□□ 0.64
SHANK3-201ENST00000262795 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-201ENST00000262795 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
SHANK3-201ENST00000262795 CCDC70Q6NSX1 233 aa19.05■□□□□ 0.64
SHANK3-201ENST00000262795 NEBLO76041 1014 aa19.05■□□□□ 0.64
SHANK3-201ENST00000262795 PDILTQ8N807 584 aa19.05■□□□□ 0.64
SHANK3-201ENST00000262795 API5Q9BZZ5 524 aaKnown RBP19.04■□□□□ 0.64
SHANK3-201ENST00000262795 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 SYCP1Q15431 976 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 CFAP70Q5T0N1 1121 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 CEBPZQ03701 1054 aaKnown RBP19.04■□□□□ 0.64
SHANK3-201ENST00000262795 ACSBG1Q96GR2 724 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 GNAI1P63096 354 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 GAS2L2Q8NHY3 880 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 CABP1Q9NZU7 370 aa19.04■□□□□ 0.64
SHANK3-201ENST00000262795 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
SHANK3-201ENST00000262795 SSBP05455 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHANK3-201ENST00000262795 SMC3Q9UQE7 1217 aa19.03■□□□□ 0.64
SHANK3-201ENST00000262795 LRP2BPQ9P2M1 347 aa19.03■□□□□ 0.64
SHANK3-201ENST00000262795 PRG4Q92954 1404 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-201ENST00000262795 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
SHANK3-201ENST00000262795 LIG1P18858 919 aa19.02■□□□□ 0.64
SHANK3-201ENST00000262795 USP47Q96K76 1375 aa19.02■□□□□ 0.63
SHANK3-201ENST00000262795 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.63
SHANK3-201ENST00000262795 PODXL2Q9NZ53 605 aa19.02■□□□□ 0.63
SHANK3-201ENST00000262795 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
SHANK3-201ENST00000262795 STK3Q13188 491 aa19.01■□□□□ 0.63
SHANK3-201ENST00000262795 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
SHANK3-201ENST00000262795 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
SHANK3-201ENST00000262795 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
SHANK3-201ENST00000262795 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
SHANK3-201ENST00000262795 PRKAR2BP31323 418 aa19■□□□□ 0.63
SHANK3-201ENST00000262795 HDGFL1Q5TGJ6 251 aa19■□□□□ 0.63
SHANK3-201ENST00000262795 ROCK1Q13464 1354 aa19■□□□□ 0.63
SHANK3-201ENST00000262795 C6orf229H3BNL8 230 aa19■□□□□ 0.63
SHANK3-201ENST00000262795 TDO2P48775 406 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 CNTROBQ8N137 903 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 SOGA3Q5TF21 947 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 STARD3NLO95772 234 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 SEPT11Q9NVA2 429 aaKnown RBP18.99■□□□□ 0.63
SHANK3-201ENST00000262795 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 HOMER1Q86YM7 354 aa18.99■□□□□ 0.63
SHANK3-201ENST00000262795 DDX49Q9Y6V7 483 aaKnown RBP18.99■□□□□ 0.63
SHANK3-201ENST00000262795 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHANK3-201ENST00000262795 ATP6V1DQ9Y5K8 247 aa18.98■□□□□ 0.63
SHANK3-201ENST00000262795 CCDC69A6NI79 296 aa18.98■□□□□ 0.63
SHANK3-201ENST00000262795 POLR3DP05423 398 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-201ENST00000262795 BIN2Q9UBW5 565 aaPredicted RBP18.98■□□□□ 0.63
SHANK3-201ENST00000262795 MIS18AQ9NYP9 233 aa18.98■□□□□ 0.63
SHANK3-201ENST00000262795 PKNOX2Q96KN3 472 aa18.97■□□□□ 0.63
SHANK3-201ENST00000262795 RBM26Q5T8P6 1007 aaKnown RBP18.97■□□□□ 0.63
SHANK3-201ENST00000262795 DDX19BQ9UMR2 479 aa18.97■□□□□ 0.63
SHANK3-201ENST00000262795 FOXO3O43524 673 aa18.97■□□□□ 0.63
SHANK3-201ENST00000262795 REC8O95072 547 aa18.97■□□□□ 0.63
SHANK3-201ENST00000262795 CLASRPQ8N2M8 674 aaKnown RBP18.96■□□□□ 0.63
SHANK3-201ENST00000262795 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
SHANK3-201ENST00000262795 KAT6BQ8WYB5 2073 aa18.96■□□□□ 0.63
SHANK3-201ENST00000262795 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
SHANK3-201ENST00000262795 RFC4P35249 363 aa18.95■□□□□ 0.62
SHANK3-201ENST00000262795 TANGO6Q9C0B7 1094 aa18.95■□□□□ 0.62
SHANK3-201ENST00000262795 IDH1O75874 414 aaKnown RBP18.95■□□□□ 0.62
SHANK3-201ENST00000262795 SLC4A2P04920 1241 aa18.94■□□□□ 0.62
SHANK3-201ENST00000262795 DRC1Q96MC2 740 aa18.94■□□□□ 0.62
SHANK3-201ENST00000262795 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
SHANK3-201ENST00000262795 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
SHANK3-201ENST00000262795 GPTP24298 496 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 SASS6Q6UVJ0 657 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 PDE4AP27815 886 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 OLFM4Q6UX06 510 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 PSMD1Q99460 953 aa18.93■□□□□ 0.62
SHANK3-201ENST00000262795 ZNF408Q9H9D4 720 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms