RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CUX1P39880 1505 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 STK3Q13188 491 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
SPG11-201ENST00000261866 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
SPG11-201ENST00000261866 TBC1D2BQ9UPU7 963 aa14.69□□□□□ -0.06
SPG11-201ENST00000261866 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
SPG11-201ENST00000261866 PIBF1Q8WXW3 757 aa14.69□□□□□ -0.06
SPG11-201ENST00000261866 HDGFL1Q5TGJ6 251 aa14.69□□□□□ -0.06
SPG11-201ENST00000261866 SAFBQ15424 915 aaKnown RBP eCLIP14.69□□□□□ -0.06
SPG11-201ENST00000261866 KIF21BO75037 1637 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 WAPLQ7Z5K2 1190 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 HSP90AB4PQ58FF6 505 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
SPG11-201ENST00000261866 CNTROBQ8N137 903 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 TTLL5Q6EMB2 1281 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 WASHC2AQ641Q2 1341 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 BCAR3O75815 825 aa14.68□□□□□ -0.06
SPG11-201ENST00000261866 SNAPC4Q5SXM2 1469 aa14.67□□□□□ -0.06
SPG11-201ENST00000261866 FKBP4Q02790 459 aaKnown RBP eCLIP14.66□□□□□ -0.06
SPG11-201ENST00000261866 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
SPG11-201ENST00000261866 BTBD11A6QL63 1104 aa14.66□□□□□ -0.06
SPG11-201ENST00000261866 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
SPG11-201ENST00000261866 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
SPG11-201ENST00000261866 PTCD1O75127 700 aaKnown RBP14.66□□□□□ -0.06
SPG11-201ENST00000261866 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
SPG11-201ENST00000261866 RTEL1-TNFRSF6BF6WH68 1400 aa14.65□□□□□ -0.06
SPG11-201ENST00000261866 ZSCAN29Q8IWY8 852 aaPredicted RBP14.65□□□□□ -0.06
SPG11-201ENST00000261866 SPG7Q9UQ90 795 aa14.65□□□□□ -0.06
SPG11-201ENST00000261866 PDILTQ8N807 584 aa14.65□□□□□ -0.06
SPG11-201ENST00000261866 ERBINQ96RT1 1412 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 NINLQ9Y2I6 1382 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
SPG11-201ENST00000261866 CCDC158Q5M9N0 1113 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 SASS6Q6UVJ0 657 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 EPS15P42566 896 aa14.64□□□□□ -0.07
SPG11-201ENST00000261866 PAF1Q8N7H5 531 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 MPHOSPH8Q99549 860 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 C9orf84Q5VXU9 1444 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 BRMS1Q9HCU9 246 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 NUP133Q8WUM0 1156 aa14.63□□□□□ -0.07
SPG11-201ENST00000261866 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
SPG11-201ENST00000261866 CDC45O75419 566 aa14.62□□□□□ -0.07
SPG11-201ENST00000261866 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
SPG11-201ENST00000261866 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
SPG11-201ENST00000261866 CHMP4BP1P59074 171 aa14.62□□□□□ -0.07
SPG11-201ENST00000261866 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
SPG11-201ENST00000261866 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
SPG11-201ENST00000261866 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
SPG11-201ENST00000261866 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
SPG11-201ENST00000261866 IPO7O95373 1038 aaKnown RBP14.61□□□□□ -0.07
SPG11-201ENST00000261866 GNAI2P04899 355 aa14.61□□□□□ -0.07
SPG11-201ENST00000261866 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
SPG11-201ENST00000261866 NBPF8Q3BBV2 869 aa14.61□□□□□ -0.07
SPG11-201ENST00000261866 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
SPG11-201ENST00000261866 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
SPG11-201ENST00000261866 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
SPG11-201ENST00000261866 ZHX3Q9H4I2 956 aa14.6□□□□□ -0.07
SPG11-201ENST00000261866 CCDC57Q2TAC2 916 aa14.6□□□□□ -0.07
SPG11-201ENST00000261866 MCM10Q7L590 875 aa14.6□□□□□ -0.07
SPG11-201ENST00000261866 GNAI3P08754 354 aa14.6□□□□□ -0.07
SPG11-201ENST00000261866 SETQ01105 290 aaPredicted RBP14.6□□□□□ -0.07
SPG11-201ENST00000261866 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
SPG11-201ENST00000261866 ODF2Q5BJF6 829 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 MPRIPQ6WCQ1 1025 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
SPG11-201ENST00000261866 CDK5RAP3Q96JB5 506 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 NEK4P51957 841 aa14.59□□□□□ -0.07
SPG11-201ENST00000261866 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.07
SPG11-201ENST00000261866 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
SPG11-201ENST00000261866 AACSQ86V21 672 aa14.58□□□□□ -0.08
SPG11-201ENST00000261866 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
SPG11-201ENST00000261866 XBP1P17861 261 aa14.58□□□□□ -0.08
SPG11-201ENST00000261866 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
SPG11-201ENST00000261866 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
SPG11-201ENST00000261866 ZNF771Q7L3S4 317 aaPredicted RBP14.58□□□□□ -0.08
SPG11-201ENST00000261866 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.08
SPG11-201ENST00000261866 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.08
SPG11-201ENST00000261866 NUDT16Q96DE0 195 aaKnown RBP14.57□□□□□ -0.08
SPG11-201ENST00000261866 PSMA5P28066 241 aa14.57□□□□□ -0.08
SPG11-201ENST00000261866 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
SPG11-201ENST00000261866 SDF4Q9BRK5 362 aa14.57□□□□□ -0.08
SPG11-201ENST00000261866 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
SPG11-201ENST00000261866 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
SPG11-201ENST00000261866 FOXO3O43524 673 aa14.56□□□□□ -0.08
SPG11-201ENST00000261866 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
SPG11-201ENST00000261866 GSE1Q14687 1217 aa14.56□□□□□ -0.08
SPG11-201ENST00000261866 PAXIP1Q6ZW49 1069 aaPredicted RBP14.56□□□□□ -0.08
SPG11-201ENST00000261866 SYNJ1O43426 1573 aa14.56□□□□□ -0.08
SPG11-201ENST00000261866 NUTM1Q86Y26 1132 aa14.56□□□□□ -0.08
SPG11-201ENST00000261866 SRCIN1Q9C0H9 1055 aa14.56□□□□□ -0.08
SPG11-201ENST00000261866 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms