RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TRDNQ13061 729 aa17.08■□□□□ 0.32
CDH1-201ENST00000261769 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
CDH1-201ENST00000261769 NOS1P29475 1434 aa17.07■□□□□ 0.32
CDH1-201ENST00000261769 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
CDH1-201ENST00000261769 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
CDH1-201ENST00000261769 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
CDH1-201ENST00000261769 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
CDH1-201ENST00000261769 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
CDH1-201ENST00000261769 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
CDH1-201ENST00000261769 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
CDH1-201ENST00000261769 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
CDH1-201ENST00000261769 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
CDH1-201ENST00000261769 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
CDH1-201ENST00000261769 PPP1R1BQ9UD71 204 aaPredicted RBP17.05■□□□□ 0.32
CDH1-201ENST00000261769 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
CDH1-201ENST00000261769 STARD3NLO95772 234 aa17.04■□□□□ 0.32
CDH1-201ENST00000261769 CLASRPQ8N2M8 674 aaKnown RBP17.04■□□□□ 0.32
CDH1-201ENST00000261769 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
CDH1-201ENST00000261769 SYAP1Q96A49 352 aaPredicted RBP17.04■□□□□ 0.32
CDH1-201ENST00000261769 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
CDH1-201ENST00000261769 DNTTIP2Q5QJE6 756 aaKnown RBP17.03■□□□□ 0.32
CDH1-201ENST00000261769 BTBD11A6QL63 1104 aa17.02■□□□□ 0.32
CDH1-201ENST00000261769 RAD21O60216 631 aa17.02■□□□□ 0.32
CDH1-201ENST00000261769 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.32
CDH1-201ENST00000261769 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.31
CDH1-201ENST00000261769 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.31
CDH1-201ENST00000261769 SLC4A2P04920 1241 aa17.02■□□□□ 0.31
CDH1-201ENST00000261769 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
CDH1-201ENST00000261769 TBC1D2BQ9UPU7 963 aa17.01■□□□□ 0.31
CDH1-201ENST00000261769 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
CDH1-201ENST00000261769 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
CDH1-201ENST00000261769 SF3A1Q15459 793 aaKnown RBP17.01■□□□□ 0.31
CDH1-201ENST00000261769 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
CDH1-201ENST00000261769 NME9Q86XW9 330 aa17■□□□□ 0.31
CDH1-201ENST00000261769 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
CDH1-201ENST00000261769 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
CDH1-201ENST00000261769 EXOC5O00471 708 aa17■□□□□ 0.31
CDH1-201ENST00000261769 NFE2L2Q16236 605 aa17■□□□□ 0.31
CDH1-201ENST00000261769 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
CDH1-201ENST00000261769 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
CDH1-201ENST00000261769 ERICH2A1L162 156 aa17■□□□□ 0.31
CDH1-201ENST00000261769 SURF6O75683 361 aaKnown RBP17■□□□□ 0.31
CDH1-201ENST00000261769 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
CDH1-201ENST00000261769 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 ITSN2Q9NZM3 1697 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 CNNM1Q9NRU3 951 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CDH1-201ENST00000261769 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 H3BQV1 296 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
CDH1-201ENST00000261769 ANO8Q9HCE9 1232 aaPredicted RBP16.99■□□□□ 0.31
CDH1-201ENST00000261769 DHX16O60231 1041 aaKnown RBP16.98■□□□□ 0.31
CDH1-201ENST00000261769 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
CDH1-201ENST00000261769 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
CDH1-201ENST00000261769 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
CDH1-201ENST00000261769 CPLX1O14810 134 aa16.98■□□□□ 0.31
CDH1-201ENST00000261769 GNAI2P04899 355 aa16.98■□□□□ 0.31
CDH1-201ENST00000261769 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
CDH1-201ENST00000261769 ZNF652Q9Y2D9 606 aa16.97■□□□□ 0.31
CDH1-201ENST00000261769 TPM4P67936 248 aa16.97■□□□□ 0.31
CDH1-201ENST00000261769 RIMS2Q9UQ26 1411 aa16.97■□□□□ 0.31
CDH1-201ENST00000261769 TRIM29Q14134 588 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 TCEAL9Q9UHQ7 104 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 MYL6BP14649 208 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 DRC7Q8IY82 874 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
CDH1-201ENST00000261769 RALYLQ86SE5 291 aaKnown RBP16.96■□□□□ 0.3
CDH1-201ENST00000261769 PANK1Q8TE04 598 aa16.96■□□□□ 0.3
CDH1-201ENST00000261769 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.3
CDH1-201ENST00000261769 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.3
CDH1-201ENST00000261769 WDR97A6NE52 1622 aa16.95■□□□□ 0.3
CDH1-201ENST00000261769 INTS3Q68E01 1043 aaKnown RBP16.95■□□□□ 0.3
CDH1-201ENST00000261769 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
CDH1-201ENST00000261769 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
CDH1-201ENST00000261769 L1TD1Q5T7N2 865 aaKnown RBP16.95■□□□□ 0.3
CDH1-201ENST00000261769 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
CDH1-201ENST00000261769 ACEP12821 1306 aa16.94■□□□□ 0.3
CDH1-201ENST00000261769 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
CDH1-201ENST00000261769 HSPA2P54652 639 aa16.94■□□□□ 0.3
CDH1-201ENST00000261769 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
CDH1-201ENST00000261769 NSD2O96028 1365 aa16.94■□□□□ 0.3
CDH1-201ENST00000261769 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
CDH1-201ENST00000261769 CCDC158Q5M9N0 1113 aa16.93■□□□□ 0.3
CDH1-201ENST00000261769 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
CDH1-201ENST00000261769 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
CDH1-201ENST00000261769 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CDH1-201ENST00000261769 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
CDH1-201ENST00000261769 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
CDH1-201ENST00000261769 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
CDH1-201ENST00000261769 ZPR1O75312 459 aa16.92■□□□□ 0.3
CDH1-201ENST00000261769 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
CDH1-201ENST00000261769 FSD1Q9BTV5 496 aa16.91■□□□□ 0.3
CDH1-201ENST00000261769 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
CDH1-201ENST00000261769 ATP10AO60312 1499 aa16.91■□□□□ 0.3
CDH1-201ENST00000261769 HIP1O00291 1037 aa16.9■□□□□ 0.3
CDH1-201ENST00000261769 TBX22Q9Y458 520 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms