RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
SLC40A1-201ENST00000261024 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
SLC40A1-201ENST00000261024 RAPGEF6Q8TEU7 1601 aa18.37■□□□□ 0.53
SLC40A1-201ENST00000261024 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 EXOSC9Q06265 439 aaKnown RBP18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 VGLL3A8MV65 326 aa18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 SSH1Q8WYL5 1049 aa18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
SLC40A1-201ENST00000261024 LETM1O95202 739 aaPredicted RBP18.35■□□□□ 0.53
SLC40A1-201ENST00000261024 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 ZGPATQ8N5A5 531 aaKnown RBP18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 CGNQ9P2M7 1197 aaKnown RBP18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 SYNMO15061 1565 aa18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 LAMC1P11047 1609 aa18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 CCDC141Q6ZP82 1450 aa18.34■□□□□ 0.53
SLC40A1-201ENST00000261024 NPC1L1Q9UHC9 1359 aa18.33■□□□□ 0.53
SLC40A1-201ENST00000261024 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
SLC40A1-201ENST00000261024 HMGN5P82970 282 aaKnown RBP18.33■□□□□ 0.52
SLC40A1-201ENST00000261024 PLB1Q6P1J6 1458 aa18.33■□□□□ 0.52
SLC40A1-201ENST00000261024 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
SLC40A1-201ENST00000261024 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
SLC40A1-201ENST00000261024 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
SLC40A1-201ENST00000261024 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 FOXD4L6Q3SYB3 417 aaPredicted RBP18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 FOXD4L3Q6VB84 417 aaPredicted RBP18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 ZNF771Q7L3S4 317 aaPredicted RBP18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 PDCL2Q8N4E4 241 aa18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 TTC12Q9H892 705 aaPredicted RBP18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 NUP160Q12769 1436 aa18.31■□□□□ 0.52
SLC40A1-201ENST00000261024 ZBTB22O15209 634 aa18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
SLC40A1-201ENST00000261024 PLCB2Q00722 1185 aa18.29■□□□□ 0.52
SLC40A1-201ENST00000261024 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
SLC40A1-201ENST00000261024 MTHFSP49914 203 aa18.29■□□□□ 0.52
SLC40A1-201ENST00000261024 MAPK8IP2Q13387 824 aaPredicted RBP18.29■□□□□ 0.52
SLC40A1-201ENST00000261024 RABEP1Q15276 862 aa18.29■□□□□ 0.52
SLC40A1-201ENST00000261024 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
SLC40A1-201ENST00000261024 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
SLC40A1-201ENST00000261024 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
SLC40A1-201ENST00000261024 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
SLC40A1-201ENST00000261024 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
SLC40A1-201ENST00000261024 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
SLC40A1-201ENST00000261024 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
SLC40A1-201ENST00000261024 TMEM51Q9NW97 253 aa18.27■□□□□ 0.52
SLC40A1-201ENST00000261024 CDC45O75419 566 aa18.27■□□□□ 0.51
SLC40A1-201ENST00000261024 USP25Q9UHP3 1055 aa18.27■□□□□ 0.51
SLC40A1-201ENST00000261024 PIBF1Q8WXW3 757 aa18.26■□□□□ 0.51
SLC40A1-201ENST00000261024 PLCD3Q8N3E9 789 aa18.26■□□□□ 0.51
SLC40A1-201ENST00000261024 CFAP53Q96M91 514 aa18.26■□□□□ 0.51
SLC40A1-201ENST00000261024 SCAF11Q99590 1463 aaKnown RBP18.25■□□□□ 0.51
SLC40A1-201ENST00000261024 ZDHHC9Q9Y397 364 aa18.24■□□□□ 0.51
SLC40A1-201ENST00000261024 CWC22Q9HCG8 908 aaKnown RBP18.23■□□□□ 0.51
SLC40A1-201ENST00000261024 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
SLC40A1-201ENST00000261024 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
SLC40A1-201ENST00000261024 ST18O60284 1047 aa18.23■□□□□ 0.51
SLC40A1-201ENST00000261024 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
SLC40A1-201ENST00000261024 MBD3O95983 291 aa18.22■□□□□ 0.51
SLC40A1-201ENST00000261024 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
SLC40A1-201ENST00000261024 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
SLC40A1-201ENST00000261024 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
SLC40A1-201ENST00000261024 GDPD2Q9HCC8 539 aa18.21■□□□□ 0.51
SLC40A1-201ENST00000261024 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
SLC40A1-201ENST00000261024 MYOM1P52179 1685 aa18.21■□□□□ 0.51
SLC40A1-201ENST00000261024 NOL8Q76FK4 1167 aaKnown RBP18.2■□□□□ 0.5
SLC40A1-201ENST00000261024 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
SLC40A1-201ENST00000261024 IQSEC2Q5JU85 1478 aa18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 RIOK3O14730 519 aaKnown RBP18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 ADCY5O95622 1261 aa18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 SYAP1Q96A49 352 aaPredicted RBP18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 GSPT1P15170 499 aaKnown RBP18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
SLC40A1-201ENST00000261024 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
SLC40A1-201ENST00000261024 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
SLC40A1-201ENST00000261024 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
SLC40A1-201ENST00000261024 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
SLC40A1-201ENST00000261024 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
SLC40A1-201ENST00000261024 KANK1Q14678 1352 aa18.17■□□□□ 0.5
SLC40A1-201ENST00000261024 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
SLC40A1-201ENST00000261024 APBB1O00213 710 aa18.17■□□□□ 0.5
SLC40A1-201ENST00000261024 TAF3Q5VWG9 929 aa18.17■□□□□ 0.5
SLC40A1-201ENST00000261024 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
SLC40A1-201ENST00000261024 KDM5AP29375 1690 aaKnown RBP18.16■□□□□ 0.5
SLC40A1-201ENST00000261024 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
SLC40A1-201ENST00000261024 CFAP74Q9C0B2 1584 aa18.16■□□□□ 0.5
SLC40A1-201ENST00000261024 PPIP5K1Q6PFW1 1433 aa18.16■□□□□ 0.5
SLC40A1-201ENST00000261024 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
SLC40A1-201ENST00000261024 HCLS1P14317 486 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms