RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 AKAP17AQ02040 695 aaKnown RBP11.68□□□□□ -0.54
CTDSPL2-201ENST00000260327 RABEP1Q15276 862 aa11.68□□□□□ -0.54
CTDSPL2-201ENST00000260327 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
CTDSPL2-201ENST00000260327 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 NAIPQ13075 1403 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 VPS53Q5VIR6 699 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 TAF3Q5VWG9 929 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
CTDSPL2-201ENST00000260327 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 AQRO60306 1485 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 C1orf141Q5JVX7 400 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 SYNE3Q6ZMZ3 975 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
CTDSPL2-201ENST00000260327 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 G3BP1Q13283 466 aaKnown RBP eCLIP11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 CDR1P51861 262 aa11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 TWISTNBQ3B726 338 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
CTDSPL2-201ENST00000260327 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.55
CTDSPL2-201ENST00000260327 CHD1LQ86WJ1 897 aa11.65□□□□□ -0.55
CTDSPL2-201ENST00000260327 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 CHMP4CQ96CF2 233 aa11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 KINO60870 393 aaKnown RBP11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
CTDSPL2-201ENST00000260327 UBTFL1P0CB47 393 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 FAM193AP78312 1265 aa11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 EHBP1L1Q8N3D4 1523 aa11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 CWC22Q9HCG8 908 aaKnown RBP11.63□□□□□ -0.55
CTDSPL2-201ENST00000260327 ERC2O15083 957 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 FILIP1Q7Z7B0 1213 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 KIAA0754O94854 1291 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 WDR63Q8IWG1 891 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 CENPHQ9H3R5 247 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 DCTN1Q14203 1278 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 GPATCH11Q8N954 259 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
CTDSPL2-201ENST00000260327 MAP4K4O95819 1239 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 DAPK1P53355 1430 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 CCP110O43303 1012 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
CTDSPL2-201ENST00000260327 POLR3GO15318 223 aaPredicted RBP11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 TBC1D2Q9BYX2 928 aa11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 SERPINC1P01008 464 aa11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 ZNF428Q96B54 188 aa11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 PANK2Q9BZ23 570 aa11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 STK3Q13188 491 aa11.6□□□□□ -0.55
CTDSPL2-201ENST00000260327 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 GTF2F1P35269 517 aaKnown RBP eCLIP11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 MCM2P49736 904 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 HSP90AB4PQ58FF6 505 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 EFCAB5A4FU69 1503 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
CTDSPL2-201ENST00000260327 SSFA2P28290 1259 aa11.58□□□□□ -0.55
CTDSPL2-201ENST00000260327 CCDC47Q96A33 483 aaKnown RBP11.58□□□□□ -0.55
CTDSPL2-201ENST00000260327 CAMK4Q16566 473 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 TNPO1Q92973 898 aaKnown RBP11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 NCOA1Q15788 1441 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 TRDNQ13061 729 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 EIF3JO75822 258 aaKnown RBP11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
CTDSPL2-201ENST00000260327 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 UBXN4Q92575 508 aa11.57□□□□□ -0.56
CTDSPL2-201ENST00000260327 CALCOCO1Q9P1Z2 691 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms