RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CNGB1Q14028 1251 aaPredicted RBP23.79■■□□□ 1.4
SRSF1-201ENST00000258962 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
SRSF1-201ENST00000258962 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
SRSF1-201ENST00000258962 PARD3Q8TEW0 1356 aa23.79■■□□□ 1.4
SRSF1-201ENST00000258962 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
SRSF1-201ENST00000258962 ACEP12821 1306 aa23.77■■□□□ 1.4
SRSF1-201ENST00000258962 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
SRSF1-201ENST00000258962 CABP1Q9NZU7 370 aa23.76■■□□□ 1.39
SRSF1-201ENST00000258962 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
SRSF1-201ENST00000258962 TNS3Q68CZ2 1445 aa23.75■■□□□ 1.39
SRSF1-201ENST00000258962 LRP6O75581 1613 aa23.75■■□□□ 1.39
SRSF1-201ENST00000258962 ADAMTS2O95450 1211 aa23.74■■□□□ 1.39
SRSF1-201ENST00000258962 RALBP1Q15311 655 aa23.74■■□□□ 1.39
SRSF1-201ENST00000258962 ARHGEF10O15013 1369 aa23.74■■□□□ 1.39
SRSF1-201ENST00000258962 POLR3AO14802 1390 aaPredicted RBP23.73■■□□□ 1.39
SRSF1-201ENST00000258962 ATAD2Q6PL18 1390 aa23.73■■□□□ 1.39
SRSF1-201ENST00000258962 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
SRSF1-201ENST00000258962 MRS2Q9HD23 443 aa23.72■■□□□ 1.39
SRSF1-201ENST00000258962 PLEKHG5O94827 1062 aa23.71■■□□□ 1.39
SRSF1-201ENST00000258962 C8orf37Q96NL8 207 aa23.71■■□□□ 1.39
SRSF1-201ENST00000258962 MYBBP1AQ9BQG0 1328 aaKnown RBP23.71■■□□□ 1.39
SRSF1-201ENST00000258962 AMER1Q5JTC6 1135 aaPredicted RBP23.7■■□□□ 1.38
SRSF1-201ENST00000258962 CC2D1BQ5T0F9 858 aaKnown RBP23.7■■□□□ 1.38
SRSF1-201ENST00000258962 KNSTRNQ9Y448 316 aa23.7■■□□□ 1.38
SRSF1-201ENST00000258962 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.38
SRSF1-201ENST00000258962 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
SRSF1-201ENST00000258962 CARD14Q9BXL6 1004 aa23.69■■□□□ 1.38
SRSF1-201ENST00000258962 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
SRSF1-201ENST00000258962 NPC1L1Q9UHC9 1359 aa23.69■■□□□ 1.38
SRSF1-201ENST00000258962 COL22A1Q8NFW1 1626 aaPredicted RBP23.69■■□□□ 1.38
SRSF1-201ENST00000258962 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
SRSF1-201ENST00000258962 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
SRSF1-201ENST00000258962 TMC1Q8TDI8 760 aa23.67■■□□□ 1.38
SRSF1-201ENST00000258962 CABLES1Q8TDN4 633 aa23.67■■□□□ 1.38
SRSF1-201ENST00000258962 ZNF692Q9BU19 519 aaPredicted RBP23.67■■□□□ 1.38
SRSF1-201ENST00000258962 BRD4O60885 1362 aaPredicted RBP23.65■■□□□ 1.38
SRSF1-201ENST00000258962 NINLQ9Y2I6 1382 aa23.65■■□□□ 1.38
SRSF1-201ENST00000258962 AFF2P51816 1311 aa23.64■■□□□ 1.38
SRSF1-201ENST00000258962 NSD3Q9BZ95 1437 aa23.64■■□□□ 1.37
SRSF1-201ENST00000258962 ANKRD36BQ8N2N9 1353 aa23.64■■□□□ 1.37
SRSF1-201ENST00000258962 TRPM3Q9HCF6 1732 aaPredicted RBP23.64■■□□□ 1.37
SRSF1-201ENST00000258962 ILDR2Q71H61 639 aa23.64■■□□□ 1.37
SRSF1-201ENST00000258962 ABTB2Q8N961 1025 aa23.64■■□□□ 1.37
SRSF1-201ENST00000258962 POTEAQ6S8J7 498 aa23.62■■□□□ 1.37
SRSF1-201ENST00000258962 CD163L1Q9NR16 1453 aa23.62■■□□□ 1.37
SRSF1-201ENST00000258962 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
SRSF1-201ENST00000258962 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
SRSF1-201ENST00000258962 USP6P35125 1406 aa23.6■■□□□ 1.37
SRSF1-201ENST00000258962 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
SRSF1-201ENST00000258962 TERF2IPQ9NYB0 399 aa23.59■■□□□ 1.37
SRSF1-201ENST00000258962 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
SRSF1-201ENST00000258962 A0A1W2PP64 1363 aa23.58■■□□□ 1.37
SRSF1-201ENST00000258962 FAM9BQ8IZU0 186 aa23.58■■□□□ 1.36
SRSF1-201ENST00000258962 USP21Q9UK80 565 aa23.58■■□□□ 1.36
SRSF1-201ENST00000258962 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
SRSF1-201ENST00000258962 CPSF1Q10570 1443 aaKnown RBP23.56■■□□□ 1.36
SRSF1-201ENST00000258962 NLRP6P59044 892 aa23.55■■□□□ 1.36
SRSF1-201ENST00000258962 PNISRQ8TF01 805 aaKnown RBP23.55■■□□□ 1.36
SRSF1-201ENST00000258962 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
SRSF1-201ENST00000258962 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
SRSF1-201ENST00000258962 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
SRSF1-201ENST00000258962 TTC21AQ8NDW8 1320 aa23.53■■□□□ 1.36
SRSF1-201ENST00000258962 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
SRSF1-201ENST00000258962 SSH2Q76I76 1423 aa23.52■■□□□ 1.36
SRSF1-201ENST00000258962 RXRBP28702 533 aa23.52■■□□□ 1.36
SRSF1-201ENST00000258962 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
SRSF1-201ENST00000258962 KIF20BQ96Q89 1820 aa23.52■■□□□ 1.36
SRSF1-201ENST00000258962 FAM83GA6ND36 823 aa23.51■■□□□ 1.35
SRSF1-201ENST00000258962 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
SRSF1-201ENST00000258962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
SRSF1-201ENST00000258962 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
SRSF1-201ENST00000258962 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
SRSF1-201ENST00000258962 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
SRSF1-201ENST00000258962 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
SRSF1-201ENST00000258962 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
SRSF1-201ENST00000258962 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
SRSF1-201ENST00000258962 UNC5CLQ8IV45 518 aa23.49■■□□□ 1.35
SRSF1-201ENST00000258962 NSD2O96028 1365 aa23.48■■□□□ 1.35
SRSF1-201ENST00000258962 GCP02774 474 aa23.48■■□□□ 1.35
SRSF1-201ENST00000258962 ABCA3Q99758 1704 aa23.48■■□□□ 1.35
SRSF1-201ENST00000258962 USP19O94966 1318 aa23.48■■□□□ 1.35
SRSF1-201ENST00000258962 RBM6P78332 1123 aaKnown RBP23.47■■□□□ 1.35
SRSF1-201ENST00000258962 BCL9LQ86UU0 1499 aa23.46■■□□□ 1.35
SRSF1-201ENST00000258962 SLIT2O94813 1529 aa23.45■■□□□ 1.34
SRSF1-201ENST00000258962 EDC4Q6P2E9 1401 aaKnown RBP23.45■■□□□ 1.34
SRSF1-201ENST00000258962 KIAA0232Q92628 1395 aa23.44■■□□□ 1.34
SRSF1-201ENST00000258962 BTG4Q9NY30 223 aa23.44■■□□□ 1.34
SRSF1-201ENST00000258962 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
SRSF1-201ENST00000258962 NME9Q86XW9 330 aa23.43■■□□□ 1.34
SRSF1-201ENST00000258962 KCNH5Q8NCM2 988 aa23.43■■□□□ 1.34
SRSF1-201ENST00000258962 MORC1Q86VD1 984 aa23.42■■□□□ 1.34
SRSF1-201ENST00000258962 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
SRSF1-201ENST00000258962 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
SRSF1-201ENST00000258962 CCDC9Q9Y3X0 531 aaKnown RBP23.41■■□□□ 1.34
SRSF1-201ENST00000258962 ATRNO75882 1429 aa23.41■■□□□ 1.34
SRSF1-201ENST00000258962 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
SRSF1-201ENST00000258962 ZBTB7CA1YPR0 619 aa23.4■■□□□ 1.34
SRSF1-201ENST00000258962 SOCS7O14512 581 aa23.4■■□□□ 1.34
SRSF1-201ENST00000258962 GJD4Q96KN9 370 aaPredicted RBP23.4■■□□□ 1.34
SRSF1-201ENST00000258962 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms