RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
SMPD2-201ENST00000258052 ESCO1Q5FWF5 840 aa28.43■■■□□ 2.14
SMPD2-201ENST00000258052 ZRANB1Q9UGI0 708 aa28.43■■■□□ 2.14
SMPD2-201ENST00000258052 XIRP1Q702N8 1843 aaKnown RBP28.43■■■□□ 2.14
SMPD2-201ENST00000258052 MTHFSP49914 203 aa28.43■■■□□ 2.14
SMPD2-201ENST00000258052 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
SMPD2-201ENST00000258052 ATF3P18847 181 aa28.41■■■□□ 2.14
SMPD2-201ENST00000258052 WDR43Q15061 677 aaKnown RBP eCLIP28.41■■■□□ 2.14
SMPD2-201ENST00000258052 COG3Q96JB2 828 aa28.41■■■□□ 2.14
SMPD2-201ENST00000258052 DCCP43146 1447 aa28.4■■■□□ 2.14
SMPD2-201ENST00000258052 TTC21AQ8NDW8 1320 aa28.4■■■□□ 2.14
SMPD2-201ENST00000258052 LRRC7Q96NW7 1537 aa28.4■■■□□ 2.14
SMPD2-201ENST00000258052 MSH6P52701 1360 aa28.38■■■□□ 2.13
SMPD2-201ENST00000258052 CFAP53Q96M91 514 aa28.38■■■□□ 2.13
SMPD2-201ENST00000258052 C1orf167Q5SNV9 1468 aa28.38■■■□□ 2.13
SMPD2-201ENST00000258052 ORAI2Q96SN7 254 aa28.37■■■□□ 2.13
SMPD2-201ENST00000258052 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
SMPD2-201ENST00000258052 ADAMTS8Q9UP79 889 aa28.35■■■□□ 2.13
SMPD2-201ENST00000258052 MST1RQ04912 1400 aa28.35■■■□□ 2.13
SMPD2-201ENST00000258052 MAP2P11137 1827 aaKnown RBP28.35■■■□□ 2.13
SMPD2-201ENST00000258052 CADPS2Q86UW7 1296 aa28.34■■■□□ 2.13
SMPD2-201ENST00000258052 OVOS2A0A0J9YW53 1432 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 OVOS2Q6IE36 1432 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 KIF1AQ12756 1690 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 INSRP06213 1382 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 PIK3C2AO00443 1686 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 SHPRHQ149N8 1683 aa28.33■■■□□ 2.13
SMPD2-201ENST00000258052 FBLN1P23142 703 aa28.32■■■□□ 2.12
SMPD2-201ENST00000258052 PSME1Q06323 249 aa28.32■■■□□ 2.12
SMPD2-201ENST00000258052 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
SMPD2-201ENST00000258052 PAK3O75914 559 aaPredicted RBP28.31■■■□□ 2.12
SMPD2-201ENST00000258052 ZBED9Q6R2W3 1325 aa28.31■■■□□ 2.12
SMPD2-201ENST00000258052 AATKQ6ZMQ8 1374 aa28.3■■■□□ 2.12
SMPD2-201ENST00000258052 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
SMPD2-201ENST00000258052 SENP3-EIF4A1A0A087X0R7 540 aa28.29■■■□□ 2.12
SMPD2-201ENST00000258052 FOXO3O43524 673 aa28.28■■■□□ 2.12
SMPD2-201ENST00000258052 USP31Q70CQ4 1352 aa28.27■■■□□ 2.12
SMPD2-201ENST00000258052 PPM1GO15355 546 aaPredicted RBP28.26■■■□□ 2.11
SMPD2-201ENST00000258052 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
SMPD2-201ENST00000258052 NLRP6P59044 892 aa28.25■■■□□ 2.11
SMPD2-201ENST00000258052 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
SMPD2-201ENST00000258052 EMILIN1Q9Y6C2 1016 aa28.25■■■□□ 2.11
SMPD2-201ENST00000258052 SMG6Q86US8 1419 aaKnown RBP28.24■■■□□ 2.11
SMPD2-201ENST00000258052 RRS1Q15050 365 aaKnown RBP28.24■■■□□ 2.11
SMPD2-201ENST00000258052 USP54Q70EL1 1684 aa28.23■■■□□ 2.11
SMPD2-201ENST00000258052 XPCQ01831 940 aaPredicted RBP28.23■■■□□ 2.11
SMPD2-201ENST00000258052 NUTM2GQ5VZR2 741 aa28.23■■■□□ 2.11
SMPD2-201ENST00000258052 PNPLA6Q8IY17 1366 aa28.23■■■□□ 2.11
SMPD2-201ENST00000258052 MARF1Q9Y4F3 1742 aaKnown RBP28.23■■■□□ 2.11
SMPD2-201ENST00000258052 SOX12O15370 315 aa28.21■■■□□ 2.11
SMPD2-201ENST00000258052 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.11
SMPD2-201ENST00000258052 KRT28Q7Z3Y7 464 aa28.2■■■□□ 2.1
SMPD2-201ENST00000258052 NUDCQ9Y266 331 aa28.2■■■□□ 2.1
SMPD2-201ENST00000258052 TRPM3Q9HCF6 1732 aaPredicted RBP28.2■■■□□ 2.1
SMPD2-201ENST00000258052 DIAPH1O60610 1272 aaKnown RBP28.19■■■□□ 2.1
SMPD2-201ENST00000258052 CCDC146Q8IYE0 955 aa28.19■■■□□ 2.1
SMPD2-201ENST00000258052 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
SMPD2-201ENST00000258052 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
SMPD2-201ENST00000258052 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
SMPD2-201ENST00000258052 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
SMPD2-201ENST00000258052 SLAIN2Q9P270 581 aa28.14■■■□□ 2.09
SMPD2-201ENST00000258052 DDX17Q92841 729 aaKnown RBP28.13■■■□□ 2.09
SMPD2-201ENST00000258052 PEAK1Q9H792 1746 aa28.13■■■□□ 2.09
SMPD2-201ENST00000258052 NPHP3Q7Z494 1330 aa28.12■■■□□ 2.09
SMPD2-201ENST00000258052 LMOD2Q6P5Q4 547 aa28.11■■■□□ 2.09
SMPD2-201ENST00000258052 BRINP3Q76B58 766 aa28.11■■■□□ 2.09
SMPD2-201ENST00000258052 LTBP4Q8N2S1 1624 aa28.11■■■□□ 2.09
SMPD2-201ENST00000258052 MAP3K19Q56UN5 1328 aa28.11■■■□□ 2.09
SMPD2-201ENST00000258052 RUNDC1Q96C34 613 aa28.09■■■□□ 2.09
SMPD2-201ENST00000258052 ALS2Q96Q42 1657 aa28.09■■■□□ 2.09
SMPD2-201ENST00000258052 APAF1O14727 1248 aa28.08■■■□□ 2.09
SMPD2-201ENST00000258052 IL13P35225 146 aa28.07■■■□□ 2.08
SMPD2-201ENST00000258052 SBNO1A3KN83 1393 aa28.07■■■□□ 2.08
SMPD2-201ENST00000258052 PXDNQ92626 1479 aa28.06■■■□□ 2.08
SMPD2-201ENST00000258052 AMPHP49418 695 aa28.06■■■□□ 2.08
SMPD2-201ENST00000258052 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
SMPD2-201ENST00000258052 FLT4P35916 1363 aa28.05■■■□□ 2.08
SMPD2-201ENST00000258052 LTN1O94822 1766 aa28.04■■■□□ 2.08
SMPD2-201ENST00000258052 NFAT5O94916 1531 aa28.04■■■□□ 2.08
SMPD2-201ENST00000258052 PLEKHG5O94827 1062 aa28.03■■■□□ 2.08
SMPD2-201ENST00000258052 HSP90AB2PQ58FF8 381 aa28.03■■■□□ 2.08
SMPD2-201ENST00000258052 KCNH5Q8NCM2 988 aa28.03■■■□□ 2.08
SMPD2-201ENST00000258052 SLIT3O75094 1523 aa28.02■■■□□ 2.08
SMPD2-201ENST00000258052 EIF4A2Q14240 407 aaKnown RBP28.01■■■□□ 2.07
SMPD2-201ENST00000258052 IQSEC2Q5JU85 1478 aa28.01■■■□□ 2.07
SMPD2-201ENST00000258052 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
SMPD2-201ENST00000258052 USP19O94966 1318 aa28■■■□□ 2.07
SMPD2-201ENST00000258052 KIF24Q5T7B8 1368 aa28■■■□□ 2.07
SMPD2-201ENST00000258052 PDE3BQ13370 1112 aa28■■■□□ 2.07
SMPD2-201ENST00000258052 TCP11L2Q8N4U5 519 aa28■■■□□ 2.07
SMPD2-201ENST00000258052 PNNQ9H307 717 aaKnown RBP28■■■□□ 2.07
SMPD2-201ENST00000258052 FCHSD2O94868 740 aa27.99■■■□□ 2.07
SMPD2-201ENST00000258052 PLEKHF1Q96S99 279 aa27.99■■■□□ 2.07
SMPD2-201ENST00000258052 GCP02774 474 aa27.98■■■□□ 2.07
SMPD2-201ENST00000258052 NGEFQ8N5V2 710 aa27.98■■■□□ 2.07
SMPD2-201ENST00000258052 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
SMPD2-201ENST00000258052 MAPK8IP3Q9UPT6 1336 aa27.97■■■□□ 2.07
SMPD2-201ENST00000258052 HMOX1P09601 288 aa27.97■■■□□ 2.07
SMPD2-201ENST00000258052 HOXC9P31274 260 aa27.97■■■□□ 2.07
SMPD2-201ENST00000258052 RRP7AQ9Y3A4 280 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms