RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 HNRNPMP52272 730 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 DBN1Q16643 649 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 MPNDQ8N594 471 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 HIRIP3Q9BW71 556 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 PHLDB1Q86UU1 1377 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 NCAPGQ9BPX3 1015 aa8.11□□□□□ -1.11
PDGFRA-201ENST00000257290 WDR43Q15061 677 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 SPAG9O60271 1321 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 A0A1B0GUA9 196 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 CCDC112Q8NEF3 446 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 TMX1Q9H3N1 280 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 PRDM4Q9UKN5 801 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 CHMP3Q9Y3E7 222 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 NEBLO76041 1014 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 IVLP07476 585 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 INCENPQ9NQS7 918 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 TMEM51Q9NW97 253 aa8.1□□□□□ -1.11
PDGFRA-201ENST00000257290 KIF16BQ96L93 1317 aa8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 MAP3K1Q13233 1512 aa8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 SH3BGRP55822 239 aaPredicted RBP8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 DCAF11Q8TEB1 546 aa8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 SPATS2LQ9NUQ6 558 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 ANAPC4Q9UJX5 808 aa8.09□□□□□ -1.11
PDGFRA-201ENST00000257290 XRCC6P12956 609 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 GRIN2AQ12879 1464 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 RAI14Q9P0K7 980 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 NUDCQ9Y266 331 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 KIF3CO14782 793 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 KDM4AO75164 1064 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 ICE2Q659A1 982 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 TAX1BP1Q86VP1 789 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 PAF1Q8N7H5 531 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 MIA2Q96PC5 1412 aa8.08□□□□□ -1.12
PDGFRA-201ENST00000257290 TCHPQ9BT92 498 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 IRAK4Q9NWZ3 460 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 RRP12Q5JTH9 1297 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 SUPT6HQ7KZ85 1726 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 ANKRD18AQ8IVF6 992 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 PCF11O94913 1555 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 IRX5P78411 483 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 NUCB2P80303 420 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 KCTD17Q8N5Z5 321 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
PDGFRA-201ENST00000257290 HDGFP51858 240 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 DNAJC5BQ9UF47 199 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 TMF1P82094 1093 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 WDR66Q8TBY9 1149 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 ZBTB9Q96C00 473 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 HSP90AB2PQ58FF8 381 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 ERCC4Q92889 916 aaPredicted RBP8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 CCDC175P0C221 793 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 U2SURPO15042 1029 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
PDGFRA-201ENST00000257290 HMMRO75330 724 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 MCM4P33991 863 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 FAM210AQ96ND0 272 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 KIF2AO00139 706 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 NUTM1Q86Y26 1132 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 TROQ12816 1431 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 UACAQ9BZF9 1416 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 FOXD1Q16676 465 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 ZCRB1Q8TBF4 217 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 ZNHIT6Q9NWK9 470 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 CCDC196A0A1B0GTZ2 297 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 GBP2P32456 591 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 FAM114A1Q8IWE2 563 aa8.05□□□□□ -1.12
PDGFRA-201ENST00000257290 PLEKHH2Q8IVE3 1493 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 GOLGA6L9A6NEM1 432 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 TRDNQ13061 729 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 DCTN1Q14203 1278 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 PPM1EQ8WY54 764 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 EIF3AQ14152 1382 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 ROCK2O75116 1388 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 EPRSP07814 1512 aaKnown RBP8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 GGT6Q6P531 493 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 CHMP4CQ96CF2 233 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
PDGFRA-201ENST00000257290 CASQ1P31415 396 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 ACRBPQ8NEB7 543 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 ARHGAP5Q13017 1502 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 KIF3BO15066 747 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms