RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
VPS25-201ENST00000253794 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
VPS25-201ENST00000253794 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
VPS25-201ENST00000253794 TTC21AQ8NDW8 1320 aa19.5■□□□□ 0.71
VPS25-201ENST00000253794 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
VPS25-201ENST00000253794 TTC21BQ7Z4L5 1316 aa19.49■□□□□ 0.71
VPS25-201ENST00000253794 HSPA1LP34931 641 aa19.48■□□□□ 0.71
VPS25-201ENST00000253794 CARD14Q9BXL6 1004 aa19.48■□□□□ 0.71
VPS25-201ENST00000253794 XPCQ01831 940 aaPredicted RBP19.47■□□□□ 0.71
VPS25-201ENST00000253794 PANK3Q9H999 370 aa19.47■□□□□ 0.71
VPS25-201ENST00000253794 USP54Q70EL1 1684 aa19.46■□□□□ 0.71
VPS25-201ENST00000253794 ARHGEF10O15013 1369 aa19.46■□□□□ 0.71
VPS25-201ENST00000253794 MED1Q15648 1581 aaPredicted RBP19.46■□□□□ 0.71
VPS25-201ENST00000253794 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
VPS25-201ENST00000253794 NSD3Q9BZ95 1437 aa19.45■□□□□ 0.7
VPS25-201ENST00000253794 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
VPS25-201ENST00000253794 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
VPS25-201ENST00000253794 PIK3C2AO00443 1686 aa19.44■□□□□ 0.7
VPS25-201ENST00000253794 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
VPS25-201ENST00000253794 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
VPS25-201ENST00000253794 JCADQ9P266 1359 aa19.44■□□□□ 0.7
VPS25-201ENST00000253794 NPC1L1Q9UHC9 1359 aa19.42■□□□□ 0.7
VPS25-201ENST00000253794 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
VPS25-201ENST00000253794 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
VPS25-201ENST00000253794 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
VPS25-201ENST00000253794 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
VPS25-201ENST00000253794 USP19O94966 1318 aa19.4■□□□□ 0.7
VPS25-201ENST00000253794 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
VPS25-201ENST00000253794 NSD2O96028 1365 aa19.4■□□□□ 0.7
VPS25-201ENST00000253794 ABTB2Q8N961 1025 aa19.39■□□□□ 0.69
VPS25-201ENST00000253794 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
VPS25-201ENST00000253794 FYB1O15117 783 aa19.38■□□□□ 0.69
VPS25-201ENST00000253794 SLIT3O75094 1523 aa19.38■□□□□ 0.69
VPS25-201ENST00000253794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS25-201ENST00000253794 KIF20BQ96Q89 1820 aa19.38■□□□□ 0.69
VPS25-201ENST00000253794 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
VPS25-201ENST00000253794 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
VPS25-201ENST00000253794 NLRP13Q86W25 1043 aa19.37■□□□□ 0.69
VPS25-201ENST00000253794 NME9Q86XW9 330 aa19.37■□□□□ 0.69
VPS25-201ENST00000253794 SPATA31A6Q5VVP1 1343 aa19.36■□□□□ 0.69
VPS25-201ENST00000253794 ABCA3Q99758 1704 aa19.36■□□□□ 0.69
VPS25-201ENST00000253794 DDX10Q13206 875 aaKnown RBP19.35■□□□□ 0.69
VPS25-201ENST00000253794 PHRF1Q9P1Y6 1649 aaKnown RBP19.35■□□□□ 0.69
VPS25-201ENST00000253794 ANKRD26Q9UPS8 1709 aa19.34■□□□□ 0.69
VPS25-201ENST00000253794 NLRP6P59044 892 aa19.34■□□□□ 0.69
VPS25-201ENST00000253794 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.68
VPS25-201ENST00000253794 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
VPS25-201ENST00000253794 NFAT5O94916 1531 aa19.31■□□□□ 0.68
VPS25-201ENST00000253794 COG3Q96JB2 828 aa19.31■□□□□ 0.68
VPS25-201ENST00000253794 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
VPS25-201ENST00000253794 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
VPS25-201ENST00000253794 NUTM2GQ5VZR2 741 aa19.3■□□□□ 0.68
VPS25-201ENST00000253794 KCNH5Q8NCM2 988 aa19.3■□□□□ 0.68
VPS25-201ENST00000253794 CPDO75976 1380 aa19.3■□□□□ 0.68
VPS25-201ENST00000253794 GCP02774 474 aa19.29■□□□□ 0.68
VPS25-201ENST00000253794 LRP6O75581 1613 aa19.29■□□□□ 0.68
VPS25-201ENST00000253794 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
VPS25-201ENST00000253794 CABLES1Q8TDN4 633 aa19.27■□□□□ 0.68
VPS25-201ENST00000253794 ABCC6O95255 1503 aa19.26■□□□□ 0.67
VPS25-201ENST00000253794 PARD3Q8TEW0 1356 aa19.24■□□□□ 0.67
VPS25-201ENST00000253794 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
VPS25-201ENST00000253794 ARHGEF25Q86VW2 580 aa19.23■□□□□ 0.67
VPS25-201ENST00000253794 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
VPS25-201ENST00000253794 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
VPS25-201ENST00000253794 MORC1Q86VD1 984 aa19.22■□□□□ 0.67
VPS25-201ENST00000253794 KIAA0232Q92628 1395 aa19.21■□□□□ 0.67
VPS25-201ENST00000253794 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
VPS25-201ENST00000253794 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
VPS25-201ENST00000253794 RTL1A6NKG5 1358 aa19.2■□□□□ 0.66
VPS25-201ENST00000253794 COL14A1Q05707 1796 aaKnown RBP19.2■□□□□ 0.66
VPS25-201ENST00000253794 COL18A1P39060 1754 aa19.19■□□□□ 0.66
VPS25-201ENST00000253794 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
VPS25-201ENST00000253794 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
VPS25-201ENST00000253794 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
VPS25-201ENST00000253794 SLIT2O94813 1529 aa19.19■□□□□ 0.66
VPS25-201ENST00000253794 RALBP1Q15311 655 aa19.18■□□□□ 0.66
VPS25-201ENST00000253794 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
VPS25-201ENST00000253794 LTN1O94822 1766 aa19.17■□□□□ 0.66
VPS25-201ENST00000253794 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
VPS25-201ENST00000253794 PRDM11Q9NQV5 511 aa19.17■□□□□ 0.66
VPS25-201ENST00000253794 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
VPS25-201ENST00000253794 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
VPS25-201ENST00000253794 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
VPS25-201ENST00000253794 FNBP4Q8N3X1 1017 aaPredicted RBP19.16■□□□□ 0.66
VPS25-201ENST00000253794 PRKRIP1Q9H875 184 aaPredicted RBP19.16■□□□□ 0.66
VPS25-201ENST00000253794 NWD2Q9ULI1 1742 aa19.16■□□□□ 0.66
VPS25-201ENST00000253794 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
VPS25-201ENST00000253794 PEAK1Q9H792 1746 aa19.15■□□□□ 0.66
VPS25-201ENST00000253794 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
VPS25-201ENST00000253794 FBLN1P23142 703 aa19.15■□□□□ 0.66
VPS25-201ENST00000253794 FLT4P35916 1363 aa19.15■□□□□ 0.66
VPS25-201ENST00000253794 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
VPS25-201ENST00000253794 PLCH1Q4KWH8 1693 aa19.14■□□□□ 0.66
VPS25-201ENST00000253794 SOX12O15370 315 aa19.14■□□□□ 0.65
VPS25-201ENST00000253794 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
VPS25-201ENST00000253794 IP6K1Q92551 441 aa19.14■□□□□ 0.65
VPS25-201ENST00000253794 INSRP06213 1382 aa19.14■□□□□ 0.65
VPS25-201ENST00000253794 CAMTA1Q9Y6Y1 1673 aa19.14■□□□□ 0.65
VPS25-201ENST00000253794 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
VPS25-201ENST00000253794 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms