RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 HAP1P54257 671 aaPredicted RBP34.31■■■■□ 3.08
SDF2L1-201ENST00000248958 ABCA3Q99758 1704 aa34.3■■■■□ 3.08
SDF2L1-201ENST00000248958 PUS7Q96PZ0 661 aaKnown RBP34.3■■■■□ 3.08
SDF2L1-201ENST00000248958 USP47Q96K76 1375 aa34.3■■■■□ 3.08
SDF2L1-201ENST00000248958 TESK2Q96S53 571 aa34.26■■■■□ 3.08
SDF2L1-201ENST00000248958 FNBP4Q8N3X1 1017 aaPredicted RBP34.25■■■■□ 3.07
SDF2L1-201ENST00000248958 ZNF692Q9BU19 519 aaPredicted RBP34.25■■■■□ 3.07
SDF2L1-201ENST00000248958 CABLES1Q8TDN4 633 aa34.24■■■■□ 3.07
SDF2L1-201ENST00000248958 AKAP12Q02952 1782 aa34.23■■■■□ 3.07
SDF2L1-201ENST00000248958 USP6P35125 1406 aa34.22■■■■□ 3.07
SDF2L1-201ENST00000248958 CRYBG1Q9Y4K1 1723 aa34.21■■■■□ 3.07
SDF2L1-201ENST00000248958 USP21Q9UK80 565 aa34.21■■■■□ 3.07
SDF2L1-201ENST00000248958 ABTB2Q8N961 1025 aa34.18■■■■□ 3.06
SDF2L1-201ENST00000248958 PLEKHG5O94827 1062 aa34.17■■■■□ 3.06
SDF2L1-201ENST00000248958 CPSF1Q10570 1443 aaKnown RBP34.16■■■■□ 3.06
SDF2L1-201ENST00000248958 TMF1P82094 1093 aa34.16■■■■□ 3.06
SDF2L1-201ENST00000248958 QTRT2Q9H974 415 aaKnown RBP34.16■■■■□ 3.06
SDF2L1-201ENST00000248958 RXRBP28702 533 aa34.15■■■■□ 3.06
SDF2L1-201ENST00000248958 TRPC5Q9UL62 973 aaPredicted RBP34.15■■■■□ 3.06
SDF2L1-201ENST00000248958 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.15■■■■□ 3.06
SDF2L1-201ENST00000248958 SSH2Q76I76 1423 aa34.14■■■■□ 3.06
SDF2L1-201ENST00000248958 PHRF1Q9P1Y6 1649 aaKnown RBP34.14■■■■□ 3.06
SDF2L1-201ENST00000248958 SLIT2O94813 1529 aa34.14■■■■□ 3.06
SDF2L1-201ENST00000248958 NINLQ9Y2I6 1382 aa34.13■■■■□ 3.05
SDF2L1-201ENST00000248958 NLRP13Q86W25 1043 aa34.13■■■■□ 3.05
SDF2L1-201ENST00000248958 NWD2Q9ULI1 1742 aa34.13■■■■□ 3.05
SDF2L1-201ENST00000248958 TMC1Q8TDI8 760 aa34.12■■■■□ 3.05
SDF2L1-201ENST00000248958 MON2Q7Z3U7 1717 aa34.12■■■■□ 3.05
SDF2L1-201ENST00000248958 BCL9LQ86UU0 1499 aa34.12■■■■□ 3.05
SDF2L1-201ENST00000248958 RBM6P78332 1123 aaKnown RBP34.11■■■■□ 3.05
SDF2L1-201ENST00000248958 CDCA8Q53HL2 280 aa34.11■■■■□ 3.05
SDF2L1-201ENST00000248958 KTN1Q86UP2 1357 aaKnown RBP34.11■■■■□ 3.05
SDF2L1-201ENST00000248958 PLCH1Q4KWH8 1693 aa34.1■■■■□ 3.05
SDF2L1-201ENST00000248958 CDK12Q9NYV4 1490 aaPredicted RBP34.1■■■■□ 3.05
SDF2L1-201ENST00000248958 TTC21AQ8NDW8 1320 aa34.09■■■■□ 3.05
SDF2L1-201ENST00000248958 COL14A1Q05707 1796 aaKnown RBP34.09■■■■□ 3.05
SDF2L1-201ENST00000248958 NUTM2GQ5VZR2 741 aa34.09■■■■□ 3.05
SDF2L1-201ENST00000248958 HDGFL2Q7Z4V5 671 aaPredicted RBP34.09■■■■□ 3.05
SDF2L1-201ENST00000248958 ATRNO75882 1429 aa34.09■■■■□ 3.05
SDF2L1-201ENST00000248958 NRKQ7Z2Y5 1582 aa34.08■■■■□ 3.05
SDF2L1-201ENST00000248958 UNC5CLQ8IV45 518 aa34.08■■■■□ 3.05
SDF2L1-201ENST00000248958 USP19O94966 1318 aa34.07■■■■□ 3.05
SDF2L1-201ENST00000248958 TTC21BQ7Z4L5 1316 aa34.07■■■■□ 3.05
SDF2L1-201ENST00000248958 TERF2IPQ9NYB0 399 aa34.07■■■■□ 3.04
SDF2L1-201ENST00000248958 SLC12A5Q9H2X9 1139 aa34.06■■■■□ 3.04
SDF2L1-201ENST00000248958 CD163L1Q9NR16 1453 aa34.06■■■■□ 3.04
SDF2L1-201ENST00000248958 FAM83GA6ND36 823 aa34.05■■■■□ 3.04
SDF2L1-201ENST00000248958 PIK3C2AO00443 1686 aa34.05■■■■□ 3.04
SDF2L1-201ENST00000248958 EIF4G2P78344 907 aaKnown RBP eCLIP34.04■■■■□ 3.04
SDF2L1-201ENST00000248958 NLRP6P59044 892 aa34.03■■■■□ 3.04
SDF2L1-201ENST00000248958 PRDM11Q9NQV5 511 aa34.01■■■■□ 3.03
SDF2L1-201ENST00000248958 KIAA0232Q92628 1395 aa33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 EDC4Q6P2E9 1401 aaKnown RBP33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 GCP02774 474 aa33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 NRAPQ86VF7 1730 aa33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 SLIT3O75094 1523 aa33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 A0A1W2PP64 1363 aa33.98■■■■□ 3.03
SDF2L1-201ENST00000248958 GJD4Q96KN9 370 aaPredicted RBP33.97■■■■□ 3.03
SDF2L1-201ENST00000248958 CPDO75976 1380 aa33.97■■■■□ 3.03
SDF2L1-201ENST00000248958 ZC3H6P61129 1189 aaKnown RBP33.96■■■■□ 3.03
SDF2L1-201ENST00000248958 BTG4Q9NY30 223 aa33.96■■■■□ 3.03
SDF2L1-201ENST00000248958 VPS72Q15906 364 aa33.95■■■■□ 3.03
SDF2L1-201ENST00000248958 ANKRD36BQ8N2N9 1353 aa33.94■■■■□ 3.02
SDF2L1-201ENST00000248958 USP54Q70EL1 1684 aa33.93■■■■□ 3.02
SDF2L1-201ENST00000248958 HSPA5P11021 654 aaKnown RBP33.93■■■■□ 3.02
SDF2L1-201ENST00000248958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.92■■■■□ 3.02
SDF2L1-201ENST00000248958 KCNH5Q8NCM2 988 aa33.92■■■■□ 3.02
SDF2L1-201ENST00000248958 RGS12O14924 1447 aa33.91■■■■□ 3.02
SDF2L1-201ENST00000248958 USP31Q70CQ4 1352 aa33.91■■■■□ 3.02
SDF2L1-201ENST00000248958 GLI3P10071 1580 aa33.89■■■■□ 3.02
SDF2L1-201ENST00000248958 CHRNA2Q15822 529 aa33.88■■■■□ 3.01
SDF2L1-201ENST00000248958 CCDC9Q9Y3X0 531 aaKnown RBP33.87■■■■□ 3.01
SDF2L1-201ENST00000248958 LMO7Q8WWI1 1683 aa33.86■■■■□ 3.01
SDF2L1-201ENST00000248958 MYOM1P52179 1685 aa33.85■■■■□ 3.01
SDF2L1-201ENST00000248958 NME9Q86XW9 330 aa33.84■■■■□ 3.01
SDF2L1-201ENST00000248958 AATKQ6ZMQ8 1374 aa33.81■■■■□ 3
SDF2L1-201ENST00000248958 CAMTA1Q9Y6Y1 1673 aa33.8■■■■□ 3
SDF2L1-201ENST00000248958 EVA1CP58658 441 aa33.79■■■■□ 3
SDF2L1-201ENST00000248958 NFAT5O94916 1531 aa33.79■■■■□ 3
SDF2L1-201ENST00000248958 SPATA31A5Q5VU36 1347 aa33.78■■■■□ 3
SDF2L1-201ENST00000248958 SPATA31A7Q8IWB4 1347 aa33.78■■■■□ 3
SDF2L1-201ENST00000248958 ONECUT3O60422 494 aaPredicted RBP33.77■■■■□ 3
SDF2L1-201ENST00000248958 ARHGEF25Q86VW2 580 aa33.77■■■■□ 3
SDF2L1-201ENST00000248958 STRN4Q9NRL3 753 aa33.77■■■■□ 3
SDF2L1-201ENST00000248958 ZRANB1Q9UGI0 708 aa33.77■■■■□ 3
SDF2L1-201ENST00000248958 OVOS2A0A0J9YW53 1432 aa33.77■■■■□ 3
SDF2L1-201ENST00000248958 OVOS2Q6IE36 1432 aa33.77■■■■□ 3
SDF2L1-201ENST00000248958 COL18A1P39060 1754 aa33.76■■■■□ 3
SDF2L1-201ENST00000248958 ABCC6O95255 1503 aa33.75■■■□□ 2.99
SDF2L1-201ENST00000248958 ZBTB7CA1YPR0 619 aa33.75■■■□□ 2.99
SDF2L1-201ENST00000248958 SOX12O15370 315 aa33.73■■■□□ 2.99
SDF2L1-201ENST00000248958 COG3Q96JB2 828 aa33.73■■■□□ 2.99
SDF2L1-201ENST00000248958 POLR3GLQ9BT43 218 aa33.73■■■□□ 2.99
SDF2L1-201ENST00000248958 COL5A2P05997 1499 aaPredicted RBP33.73■■■□□ 2.99
SDF2L1-201ENST00000248958 SPATA31A1Q5TZJ5 1347 aa33.72■■■□□ 2.99
SDF2L1-201ENST00000248958 KIF20BQ96Q89 1820 aa33.71■■■□□ 2.99
SDF2L1-201ENST00000248958 SEPT12Q8IYM1 358 aa33.7■■■□□ 2.99
SDF2L1-201ENST00000248958 LTN1O94822 1766 aa33.7■■■□□ 2.98
SDF2L1-201ENST00000248958 BRWD3Q6RI45 1802 aa33.67■■■□□ 2.98
SDF2L1-201ENST00000248958 FYB1O15117 783 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms