RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
ATP7B-201ENST00000242839 PIP4K2BP78356 416 aa13.5□□□□□ -0.25
ATP7B-201ENST00000242839 SMARCE1Q969G3 411 aa13.5□□□□□ -0.25
ATP7B-201ENST00000242839 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 DEF6Q9H4E7 631 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 SSR1P43307 286 aaKnown RBP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 SSBP05455 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 MYL6BP14649 208 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
ATP7B-201ENST00000242839 PSMA5P28066 241 aa13.49□□□□□ -0.25
ATP7B-201ENST00000242839 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
ATP7B-201ENST00000242839 TXLNAP40222 546 aa13.48□□□□□ -0.25
ATP7B-201ENST00000242839 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
ATP7B-201ENST00000242839 SERPINC1P01008 464 aa13.48□□□□□ -0.25
ATP7B-201ENST00000242839 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
ATP7B-201ENST00000242839 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
ATP7B-201ENST00000242839 ZRSR2Q15696 482 aaKnown RBP13.47□□□□□ -0.25
ATP7B-201ENST00000242839 FIBPO43427 364 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
ATP7B-201ENST00000242839 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
ATP7B-201ENST00000242839 NUCB2P80303 420 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 CCDC181Q5TID7 509 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
ATP7B-201ENST00000242839 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
ATP7B-201ENST00000242839 UACAQ9BZF9 1416 aa13.46□□□□□ -0.25
ATP7B-201ENST00000242839 NLRP6P59044 892 aa13.46□□□□□ -0.25
ATP7B-201ENST00000242839 ERCC4Q92889 916 aaPredicted RBP13.46□□□□□ -0.25
ATP7B-201ENST00000242839 CCDC69A6NI79 296 aa13.46□□□□□ -0.26
ATP7B-201ENST00000242839 CDC45O75419 566 aa13.46□□□□□ -0.26
ATP7B-201ENST00000242839 USP5P45974 858 aa13.46□□□□□ -0.26
ATP7B-201ENST00000242839 STK38Q15208 465 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
ATP7B-201ENST00000242839 USP47Q96K76 1375 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 ERLIN2O94905 339 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 GNAI1P63096 354 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
ATP7B-201ENST00000242839 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 PAXIP1Q6ZW49 1069 aaPredicted RBP13.44□□□□□ -0.26
ATP7B-201ENST00000242839 TTC16Q8NEE8 873 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 PSMD1Q99460 953 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 ZNF76P36508 570 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
ATP7B-201ENST00000242839 TAF3Q5VWG9 929 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
ATP7B-201ENST00000242839 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATP7B-201ENST00000242839 NEK4P51957 841 aa13.43□□□□□ -0.26
ATP7B-201ENST00000242839 LEKR1Q6ZMV7 388 aa13.43□□□□□ -0.26
ATP7B-201ENST00000242839 CWC15Q9P013 229 aaKnown RBP13.43□□□□□ -0.26
ATP7B-201ENST00000242839 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
ATP7B-201ENST00000242839 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
ATP7B-201ENST00000242839 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
ATP7B-201ENST00000242839 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
ATP7B-201ENST00000242839 CABP4P57796 275 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
ATP7B-201ENST00000242839 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 GBP2P32456 591 aaPredicted RBP13.41□□□□□ -0.26
ATP7B-201ENST00000242839 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
ATP7B-201ENST00000242839 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
ATP7B-201ENST00000242839 ME1P48163 572 aa13.4□□□□□ -0.26
ATP7B-201ENST00000242839 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
ATP7B-201ENST00000242839 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
ATP7B-201ENST00000242839 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
ATP7B-201ENST00000242839 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
ATP7B-201ENST00000242839 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
ATP7B-201ENST00000242839 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.39□□□□□ -0.277e-7■■■■■ 27.5
ATP7B-201ENST00000242839 PRKRIP1Q9H875 184 aaPredicted RBP13.39□□□□□ -0.27
ATP7B-201ENST00000242839 LIG1P18858 919 aa13.38□□□□□ -0.27
ATP7B-201ENST00000242839 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
ATP7B-201ENST00000242839 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
ATP7B-201ENST00000242839 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
ATP7B-201ENST00000242839 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
ATP7B-201ENST00000242839 JPH4Q96JJ6 628 aa13.38□□□□□ -0.27
ATP7B-201ENST00000242839 TMX1Q9H3N1 280 aa13.38□□□□□ -0.27
ATP7B-201ENST00000242839 NOB1Q9ULX3 412 aaKnown RBP13.38□□□□□ -0.27
ATP7B-201ENST00000242839 MPHOSPH8Q99549 860 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
ATP7B-201ENST00000242839 RAI14Q9P0K7 980 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 TRAK2O60296 914 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 KIAA0754O94854 1291 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 STIM1Q13586 685 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 TDO2P48775 406 aa13.37□□□□□ -0.27
ATP7B-201ENST00000242839 ERC1Q8IUD2 1116 aa13.36□□□□□ -0.27
ATP7B-201ENST00000242839 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
ATP7B-201ENST00000242839 CCDC112Q8NEF3 446 aa13.36□□□□□ -0.27
ATP7B-201ENST00000242839 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms