RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 SPATA31E1Q6ZUB1 1445 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 PDE3BQ13370 1112 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 PRDM11Q9NQV5 511 aa3.38□□□□□ -1.87
PRKD3-201ENST00000234179 TULP4Q9NRJ4 1543 aa3.37□□□□□ -1.87
PRKD3-201ENST00000234179 BCL9O00512 1426 aa3.37□□□□□ -1.87
PRKD3-201ENST00000234179 CPDO75976 1380 aa3.37□□□□□ -1.87
PRKD3-201ENST00000234179 YY1P25490 414 aa3.37□□□□□ -1.87
PRKD3-201ENST00000234179 ZNF219Q9P2Y4 722 aaPredicted RBP3.37□□□□□ -1.87
PRKD3-201ENST00000234179 MAP3K5Q99683 1374 aa3.37□□□□□ -1.87
PRKD3-201ENST00000234179 KCNQ2O43526 872 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 PLSCR1O15162 318 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 NGDNQ8NEJ9 315 aaKnown RBP3.36□□□□□ -1.87
PRKD3-201ENST00000234179 ABCC6O95255 1503 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 RGPD3A6NKT7 1758 aaPredicted RBP3.36□□□□□ -1.87
PRKD3-201ENST00000234179 RGPD4Q7Z3J3 1758 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 OVOS2A0A0G2JMS6 1433 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 OVOS2A0A0J9YW53 1432 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 OVOS2Q6IE36 1432 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 PLCH1Q4KWH8 1693 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 DEFB132Q7Z7B7 95 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 CAMKK2Q96RR4 588 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 SPATA31A1Q5TZJ5 1347 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 THSD7AQ9UPZ6 1657 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 TCP11L2Q8N4U5 519 aa3.36□□□□□ -1.87
PRKD3-201ENST00000234179 LMOD2Q6P5Q4 547 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 NLRP13Q86W25 1043 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 SLC16A10Q8TF71 515 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 BTG4Q9NY30 223 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 AATKQ6ZMQ8 1374 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 EVA1CP58658 441 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 STK32BQ9NY57 414 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 WASLO00401 505 aaPredicted RBP3.35□□□□□ -1.87
PRKD3-201ENST00000234179 SLC24A1O60721 1099 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 DDX17Q92841 729 aaKnown RBP3.35□□□□□ -1.87
PRKD3-201ENST00000234179 ITSN1Q15811 1721 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 PLEKHG3A1L390 1219 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 APBA3O96018 575 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 FAM98CQ17RN3 349 aaKnown RBP3.35□□□□□ -1.87
PRKD3-201ENST00000234179 NRAPQ86VF7 1730 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 SSH2Q76I76 1423 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 CCDC7Q96M83 1385 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 ADGRF5Q8IZF2 1346 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 STK26Q9P289 416 aa3.35□□□□□ -1.87
PRKD3-201ENST00000234179 LOC105371045A0A1W2PR82 267 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 FAM83GA6ND36 823 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 R3HDM1Q15032 1099 aaKnown RBP3.34□□□□□ -1.87
PRKD3-201ENST00000234179 IFT172Q9UG01 1749 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 KCNH5Q8NCM2 988 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 POLR3AO14802 1390 aaPredicted RBP3.34□□□□□ -1.87
PRKD3-201ENST00000234179 USP19O94966 1318 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 ABCA3Q99758 1704 aa3.34□□□□□ -1.87
PRKD3-201ENST00000234179 CAPN15O75808 1086 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 ITGAEP38570 1179 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 EN1Q05925 392 aaPredicted RBP3.34□□□□□ -1.88
PRKD3-201ENST00000234179 PRAM1Q96QH2 718 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 MPHOSPH9Q99550 1183 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 CCDC61Q9Y6R9 512 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 WAPLQ7Z5K2 1190 aa3.34□□□□□ -1.88
PRKD3-201ENST00000234179 BCL11BQ9C0K0 894 aaPredicted RBP3.34□□□□□ -1.88
PRKD3-201ENST00000234179 ALS2Q96Q42 1657 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 CRB1P82279 1406 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 PSDA5PKW4 1024 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-201ENST00000234179 GRIN3BO60391 1043 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 MTFR1LQ9H019 292 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 RREB1Q92766 1687 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 XPCQ01831 940 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-201ENST00000234179 ZNF692Q9BU19 519 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-201ENST00000234179 TRPM3Q9HCF6 1732 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-201ENST00000234179 POLD1P28340 1107 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 TNS1Q9HBL0 1735 aaKnown RBP3.33□□□□□ -1.88
PRKD3-201ENST00000234179 TTC21AQ8NDW8 1320 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 CAMTA1Q9Y6Y1 1673 aa3.33□□□□□ -1.88
PRKD3-201ENST00000234179 EZH2Q15910 746 aaKnown RBP3.32□□□□□ -1.88
PRKD3-201ENST00000234179 DDB1Q16531 1140 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 KIAA0232Q92628 1395 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 PLEKHH1Q9ULM0 1364 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 BRWD3Q6RI45 1802 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 NUDT16Q96DE0 195 aaKnown RBP3.32□□□□□ -1.88
PRKD3-201ENST00000234179 NSD3Q9BZ95 1437 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 ADGRB1O14514 1584 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 PAK3O75914 559 aaPredicted RBP3.32□□□□□ -1.88
PRKD3-201ENST00000234179 RGL3Q3MIN7 710 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 FLAD1Q8NFF5 587 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 TRIM37O94972 964 aa3.32□□□□□ -1.88
PRKD3-201ENST00000234179 PARP4Q9UKK3 1724 aaKnown RBP3.31□□□□□ -1.88
PRKD3-201ENST00000234179 SLC27A3Q5K4L6 730 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 CFAP70Q5T0N1 1121 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 TMEM132EQ6IEE7 984 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 CARD10Q9BWT7 1032 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 KIAA1210Q9ULL0 1709 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 PUS7Q96PZ0 661 aaKnown RBP3.31□□□□□ -1.88
PRKD3-201ENST00000234179 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 NUTM2FA1L443 756 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 CABLES1Q8TDN4 633 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 STRN4Q9NRL3 753 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 EXOC5O00471 708 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 C1QTNF8P60827 252 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 PMFBP1Q8TBY8 1022 aa3.31□□□□□ -1.88
PRKD3-201ENST00000234179 GIGYF1O75420 1035 aaPredicted RBP3.3□□□□□ -1.88
PRKD3-201ENST00000234179 IFFO2Q5TF58 517 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms