RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 LMOD2Q6P5Q4 547 aa27.49■■□□□ 1.99
HOXA6-201ENST00000222728 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
HOXA6-201ENST00000222728 HDGFL2Q7Z4V5 671 aaPredicted RBP27.48■■□□□ 1.99
HOXA6-201ENST00000222728 COL22A1Q8NFW1 1626 aaPredicted RBP27.48■■□□□ 1.99
HOXA6-201ENST00000222728 TERF2IPQ9NYB0 399 aa27.47■■□□□ 1.99
HOXA6-201ENST00000222728 ABCA3Q99758 1704 aa27.47■■□□□ 1.99
HOXA6-201ENST00000222728 CCDC7Q96M83 1385 aa27.47■■□□□ 1.99
HOXA6-201ENST00000222728 PLEKHG5O94827 1062 aa27.46■■□□□ 1.99
HOXA6-201ENST00000222728 ZNF692Q9BU19 519 aaPredicted RBP27.46■■□□□ 1.99
HOXA6-201ENST00000222728 PIK3C2AO00443 1686 aa27.46■■□□□ 1.99
HOXA6-201ENST00000222728 WASHC2AQ641Q2 1341 aa27.45■■□□□ 1.99
HOXA6-201ENST00000222728 ANKRD36BQ8N2N9 1353 aa27.45■■□□□ 1.98
HOXA6-201ENST00000222728 SSH2Q76I76 1423 aa27.44■■□□□ 1.98
HOXA6-201ENST00000222728 CRYBG1Q9Y4K1 1723 aa27.44■■□□□ 1.98
HOXA6-201ENST00000222728 MARF1Q9Y4F3 1742 aaKnown RBP27.42■■□□□ 1.98
HOXA6-201ENST00000222728 NUTM2GQ5VZR2 741 aa27.42■■□□□ 1.98
HOXA6-201ENST00000222728 TTC21BQ7Z4L5 1316 aa27.41■■□□□ 1.98
HOXA6-201ENST00000222728 KIF20BQ96Q89 1820 aa27.41■■□□□ 1.98
HOXA6-201ENST00000222728 ARHGEF10O15013 1369 aa27.41■■□□□ 1.98
HOXA6-201ENST00000222728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.41■■□□□ 1.98
HOXA6-201ENST00000222728 BRD4O60885 1362 aaPredicted RBP27.4■■□□□ 1.98
HOXA6-201ENST00000222728 EDC4Q6P2E9 1401 aaKnown RBP27.4■■□□□ 1.98
HOXA6-201ENST00000222728 NUTM2BA6NNL0 878 aaPredicted RBP27.39■■□□□ 1.98
HOXA6-201ENST00000222728 NUTM2EB1AL46 878 aaPredicted RBP27.39■■□□□ 1.98
HOXA6-201ENST00000222728 NUTM2AQ8IVF1 878 aaPredicted RBP27.39■■□□□ 1.98
HOXA6-201ENST00000222728 ABTB2Q8N961 1025 aa27.39■■□□□ 1.98
HOXA6-201ENST00000222728 PHRF1Q9P1Y6 1649 aaKnown RBP27.38■■□□□ 1.97
HOXA6-201ENST00000222728 CABLES1Q8TDN4 633 aa27.38■■□□□ 1.97
HOXA6-201ENST00000222728 MED1Q15648 1581 aaPredicted RBP27.38■■□□□ 1.97
HOXA6-201ENST00000222728 LRP6O75581 1613 aa27.37■■□□□ 1.97
HOXA6-201ENST00000222728 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
HOXA6-201ENST00000222728 NSD3Q9BZ95 1437 aa27.35■■□□□ 1.97
HOXA6-201ENST00000222728 PANK3Q9H999 370 aa27.35■■□□□ 1.97
HOXA6-201ENST00000222728 SPATA31A6Q5VVP1 1343 aa27.35■■□□□ 1.97
HOXA6-201ENST00000222728 TTC21AQ8NDW8 1320 aa27.35■■□□□ 1.97
HOXA6-201ENST00000222728 NME9Q86XW9 330 aa27.34■■□□□ 1.97
HOXA6-201ENST00000222728 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
HOXA6-201ENST00000222728 USP54Q70EL1 1684 aa27.33■■□□□ 1.97
HOXA6-201ENST00000222728 NLRP6P59044 892 aa27.31■■□□□ 1.96
HOXA6-201ENST00000222728 HAP1P54257 671 aaPredicted RBP27.29■■□□□ 1.96
HOXA6-201ENST00000222728 ADAMTS2O95450 1211 aa27.28■■□□□ 1.96
HOXA6-201ENST00000222728 NLRP13Q86W25 1043 aa27.28■■□□□ 1.96
HOXA6-201ENST00000222728 ANKRD26Q9UPS8 1709 aa27.27■■□□□ 1.96
HOXA6-201ENST00000222728 USP19O94966 1318 aa27.26■■□□□ 1.95
HOXA6-201ENST00000222728 SLIT3O75094 1523 aa27.26■■□□□ 1.95
HOXA6-201ENST00000222728 MEX3CQ5U5Q3 659 aaKnown RBP27.25■■□□□ 1.95
HOXA6-201ENST00000222728 GGNBP2Q9H3C7 697 aa27.24■■□□□ 1.95
HOXA6-201ENST00000222728 OVOS2A0A0J9YW53 1432 aa27.24■■□□□ 1.95
HOXA6-201ENST00000222728 OVOS2Q6IE36 1432 aa27.24■■□□□ 1.95
HOXA6-201ENST00000222728 USP31Q70CQ4 1352 aa27.23■■□□□ 1.95
HOXA6-201ENST00000222728 LTN1O94822 1766 aa27.23■■□□□ 1.95
HOXA6-201ENST00000222728 FYB1O15117 783 aa27.23■■□□□ 1.95
HOXA6-201ENST00000222728 SOX12O15370 315 aa27.22■■□□□ 1.95
HOXA6-201ENST00000222728 PLCH1Q4KWH8 1693 aa27.21■■□□□ 1.95
HOXA6-201ENST00000222728 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
HOXA6-201ENST00000222728 RGPD5Q99666 1765 aa27.2■■□□□ 1.94
HOXA6-201ENST00000222728 CGNL1Q0VF96 1302 aa27.19■■□□□ 1.94
HOXA6-201ENST00000222728 GCP02774 474 aa27.19■■□□□ 1.94
HOXA6-201ENST00000222728 ZC3H6P61129 1189 aaKnown RBP27.19■■□□□ 1.94
HOXA6-201ENST00000222728 KNSTRNQ9Y448 316 aa27.19■■□□□ 1.94
HOXA6-201ENST00000222728 NFAT5O94916 1531 aa27.18■■□□□ 1.94
HOXA6-201ENST00000222728 COG3Q96JB2 828 aa27.18■■□□□ 1.94
HOXA6-201ENST00000222728 C8orf37Q96NL8 207 aa27.18■■□□□ 1.94
HOXA6-201ENST00000222728 MAP2P11137 1827 aaKnown RBP27.17■■□□□ 1.94
HOXA6-201ENST00000222728 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
HOXA6-201ENST00000222728 KIAA0232Q92628 1395 aa27.15■■□□□ 1.94
HOXA6-201ENST00000222728 ZBTB7CA1YPR0 619 aa27.15■■□□□ 1.94
HOXA6-201ENST00000222728 PER1O15534 1290 aaPredicted RBP27.15■■□□□ 1.94
HOXA6-201ENST00000222728 DDX10Q13206 875 aaKnown RBP27.15■■□□□ 1.94
HOXA6-201ENST00000222728 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
HOXA6-201ENST00000222728 CHRNA2Q15822 529 aa27.13■■□□□ 1.93
HOXA6-201ENST00000222728 COL18A1P39060 1754 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 FAM83GA6ND36 823 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 FBLN1P23142 703 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 CNGB1Q14028 1251 aaPredicted RBP27.12■■□□□ 1.93
HOXA6-201ENST00000222728 KCNH5Q8NCM2 988 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 PRDM11Q9NQV5 511 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 NWD2Q9ULI1 1742 aa27.12■■□□□ 1.93
HOXA6-201ENST00000222728 AMER1Q5JTC6 1135 aaPredicted RBP27.11■■□□□ 1.93
HOXA6-201ENST00000222728 AFF2P51816 1311 aa27.1■■□□□ 1.93
HOXA6-201ENST00000222728 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
HOXA6-201ENST00000222728 LMO7Q8WWI1 1683 aa27.09■■□□□ 1.93
HOXA6-201ENST00000222728 PHF23Q9BUL5 403 aaPredicted RBP27.09■■□□□ 1.93
HOXA6-201ENST00000222728 CPDO75976 1380 aa27.09■■□□□ 1.93
HOXA6-201ENST00000222728 CC2D1BQ5T0F9 858 aaKnown RBP27.08■■□□□ 1.93
HOXA6-201ENST00000222728 NSD2O96028 1365 aa27.08■■□□□ 1.93
HOXA6-201ENST00000222728 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.07■■□□□ 1.92
HOXA6-201ENST00000222728 SLIT2O94813 1529 aa27.06■■□□□ 1.92
HOXA6-201ENST00000222728 TNNT2P45379 298 aaPredicted RBP27.06■■□□□ 1.92
HOXA6-201ENST00000222728 ARHGEF25Q86VW2 580 aa27.05■■□□□ 1.92
HOXA6-201ENST00000222728 RGS17Q9UGC6 210 aaPredicted RBP27.04■■□□□ 1.92
HOXA6-201ENST00000222728 CAMTA1Q9Y6Y1 1673 aa27.04■■□□□ 1.92
HOXA6-201ENST00000222728 PEAK1Q9H792 1746 aa27.04■■□□□ 1.92
HOXA6-201ENST00000222728 RRS1Q15050 365 aaKnown RBP27.03■■□□□ 1.92
HOXA6-201ENST00000222728 MORC1Q86VD1 984 aa27.03■■□□□ 1.92
HOXA6-201ENST00000222728 FNBP4Q8N3X1 1017 aaPredicted RBP27.03■■□□□ 1.92
HOXA6-201ENST00000222728 BTG4Q9NY30 223 aa27.03■■□□□ 1.92
HOXA6-201ENST00000222728 BCL9LQ86UU0 1499 aa27.02■■□□□ 1.92
HOXA6-201ENST00000222728 USP21Q9UK80 565 aa27.02■■□□□ 1.92
HOXA6-201ENST00000222728 MAP3K19Q56UN5 1328 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms