RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 NUCB2P80303 420 aa13.3□□□□□ -0.28
KNOP1-201ENST00000219837 SYCP1Q15431 976 aa13.3□□□□□ -0.28
KNOP1-201ENST00000219837 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
KNOP1-201ENST00000219837 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
KNOP1-201ENST00000219837 CCDC173Q0VFZ6 552 aa13.29□□□□□ -0.28
KNOP1-201ENST00000219837 SMC2O95347 1197 aa13.29□□□□□ -0.28
KNOP1-201ENST00000219837 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 TOM1L2Q6ZVM7 507 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 RDXP35241 583 aaKnown RBP13.28□□□□□ -0.28
KNOP1-201ENST00000219837 ACBD3Q9H3P7 528 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
KNOP1-201ENST00000219837 MYL6BP14649 208 aa13.28□□□□□ -0.28
KNOP1-201ENST00000219837 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
KNOP1-201ENST00000219837 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.28□□□□□ -0.28
KNOP1-201ENST00000219837 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.28
KNOP1-201ENST00000219837 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.28
KNOP1-201ENST00000219837 TXLNAP40222 546 aa13.27□□□□□ -0.28
KNOP1-201ENST00000219837 MYO6Q9UM54 1294 aa13.27□□□□□ -0.29
KNOP1-201ENST00000219837 HIP1O00291 1037 aa13.27□□□□□ -0.29
KNOP1-201ENST00000219837 CCDC69A6NI79 296 aa13.27□□□□□ -0.29
KNOP1-201ENST00000219837 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.29
KNOP1-201ENST00000219837 SIL1Q9H173 461 aa13.27□□□□□ -0.29
KNOP1-201ENST00000219837 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
KNOP1-201ENST00000219837 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
KNOP1-201ENST00000219837 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
KNOP1-201ENST00000219837 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
KNOP1-201ENST00000219837 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
KNOP1-201ENST00000219837 STK3Q13188 491 aa13.25□□□□□ -0.29
KNOP1-201ENST00000219837 CLASRPQ8N2M8 674 aaKnown RBP13.25□□□□□ -0.29
KNOP1-201ENST00000219837 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
KNOP1-201ENST00000219837 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■□□□ 14.4
KNOP1-201ENST00000219837 SDF4Q9BRK5 362 aa13.25□□□□□ -0.29
KNOP1-201ENST00000219837 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
KNOP1-201ENST00000219837 ZHX3Q9H4I2 956 aa13.25□□□□□ -0.29
KNOP1-201ENST00000219837 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
KNOP1-201ENST00000219837 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
KNOP1-201ENST00000219837 MTHFSP49914 203 aa13.24□□□□□ -0.29
KNOP1-201ENST00000219837 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
KNOP1-201ENST00000219837 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
KNOP1-201ENST00000219837 CDK19Q9BWU1 502 aa13.24□□□□□ -0.29
KNOP1-201ENST00000219837 FILIP1LQ4L180 1135 aa13.24□□□□□ -0.29
KNOP1-201ENST00000219837 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
KNOP1-201ENST00000219837 GNAI3P08754 354 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 GNAI2P04899 355 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 IBSPP21815 317 aaPredicted RBP13.23□□□□□ -0.29
KNOP1-201ENST00000219837 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
KNOP1-201ENST00000219837 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
KNOP1-201ENST00000219837 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
KNOP1-201ENST00000219837 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
KNOP1-201ENST00000219837 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
KNOP1-201ENST00000219837 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
KNOP1-201ENST00000219837 TSPY26PQ9H489 355 aa13.21□□□□□ -0.29
KNOP1-201ENST00000219837 KIF21BO75037 1637 aa13.21□□□□□ -0.29
KNOP1-201ENST00000219837 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
KNOP1-201ENST00000219837 ANKRD50Q9ULJ7 1429 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
KNOP1-201ENST00000219837 HSP90B2PQ58FF3 399 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
KNOP1-201ENST00000219837 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
KNOP1-201ENST00000219837 BTBD11A6QL63 1104 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 NCOA2Q15596 1464 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 STK38Q15208 465 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
KNOP1-201ENST00000219837 TRIM5Q9C035 493 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
KNOP1-201ENST00000219837 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
KNOP1-201ENST00000219837 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
KNOP1-201ENST00000219837 SEPT11Q9NVA2 429 aaKnown RBP13.18□□□□□ -0.3
KNOP1-201ENST00000219837 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 ZNF76P36508 570 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
KNOP1-201ENST00000219837 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
KNOP1-201ENST00000219837 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
KNOP1-201ENST00000219837 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
KNOP1-201ENST00000219837 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
KNOP1-201ENST00000219837 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
KNOP1-201ENST00000219837 PNISRQ8TF01 805 aaKnown RBP13.17□□□□□ -0.3
KNOP1-201ENST00000219837 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms