RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 FRAT2O75474 233 aaPredicted RBP23.46■■□□□ 1.35
RSPO4-201ENST00000217260 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
RSPO4-201ENST00000217260 RSPH6AQ9H0K4 717 aa23.45■■□□□ 1.34
RSPO4-201ENST00000217260 SEC24BO95487 1268 aa23.45■■□□□ 1.34
RSPO4-201ENST00000217260 CT47B1P0C2W7 299 aaPredicted RBP23.44■■□□□ 1.34
RSPO4-201ENST00000217260 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
RSPO4-201ENST00000217260 FAM43AQ8N2R8 423 aa23.44■■□□□ 1.34
RSPO4-201ENST00000217260 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
RSPO4-201ENST00000217260 FBXO31Q5XUX0 539 aaPredicted RBP23.44■■□□□ 1.34
RSPO4-201ENST00000217260 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
RSPO4-201ENST00000217260 MVPQ14764 893 aaKnown RBP23.43■■□□□ 1.34
RSPO4-201ENST00000217260 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
RSPO4-201ENST00000217260 FTSJ3Q8IY81 847 aaKnown RBP23.42■■□□□ 1.34
RSPO4-201ENST00000217260 TRIM35Q9UPQ4 493 aa23.42■■□□□ 1.34
RSPO4-201ENST00000217260 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
RSPO4-201ENST00000217260 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
RSPO4-201ENST00000217260 DZIP1LQ8IYY4 767 aaKnown RBP23.41■■□□□ 1.34
RSPO4-201ENST00000217260 MED14O60244 1454 aa23.41■■□□□ 1.34
RSPO4-201ENST00000217260 HDGFL2Q7Z4V5 671 aaPredicted RBP23.4■■□□□ 1.34
RSPO4-201ENST00000217260 CLTCQ00610 1675 aaKnown RBP23.4■■□□□ 1.34
RSPO4-201ENST00000217260 ANKRD26Q9UPS8 1709 aa23.4■■□□□ 1.34
RSPO4-201ENST00000217260 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
RSPO4-201ENST00000217260 CDK19Q9BWU1 502 aa23.4■■□□□ 1.34
RSPO4-201ENST00000217260 SMC4Q9NTJ3 1288 aa23.4■■□□□ 1.34
RSPO4-201ENST00000217260 STAG3Q9UJ98 1225 aa23.39■■□□□ 1.33
RSPO4-201ENST00000217260 ALKQ9UM73 1620 aa23.38■■□□□ 1.33
RSPO4-201ENST00000217260 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
RSPO4-201ENST00000217260 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
RSPO4-201ENST00000217260 RIPK4P57078 832 aa23.37■■□□□ 1.33
RSPO4-201ENST00000217260 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
RSPO4-201ENST00000217260 SSH1Q8WYL5 1049 aa23.36■■□□□ 1.33
RSPO4-201ENST00000217260 IL16Q14005 1332 aa23.35■■□□□ 1.33
RSPO4-201ENST00000217260 TRIM27P14373 513 aa23.35■■□□□ 1.33
RSPO4-201ENST00000217260 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
RSPO4-201ENST00000217260 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
RSPO4-201ENST00000217260 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
RSPO4-201ENST00000217260 ATF7IPQ6VMQ6 1270 aa23.32■■□□□ 1.32
RSPO4-201ENST00000217260 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
RSPO4-201ENST00000217260 BECN1Q14457 450 aa23.31■■□□□ 1.32
RSPO4-201ENST00000217260 ITPRIPQ8IWB1 547 aa23.31■■□□□ 1.32
RSPO4-201ENST00000217260 DDX19BQ9UMR2 479 aa23.31■■□□□ 1.32
RSPO4-201ENST00000217260 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
RSPO4-201ENST00000217260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.3■■□□□ 1.32
RSPO4-201ENST00000217260 KIF20BQ96Q89 1820 aa23.3■■□□□ 1.32
RSPO4-201ENST00000217260 FCHSD2O94868 740 aa23.29■■□□□ 1.32
RSPO4-201ENST00000217260 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
RSPO4-201ENST00000217260 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
RSPO4-201ENST00000217260 TBC1D32Q96NH3 1257 aa23.27■■□□□ 1.32
RSPO4-201ENST00000217260 HDAC1Q13547 482 aaPredicted RBP23.27■■□□□ 1.32
RSPO4-201ENST00000217260 FBLN1P23142 703 aa23.26■■□□□ 1.31
RSPO4-201ENST00000217260 POLKQ9UBT6 870 aa23.25■■□□□ 1.31
RSPO4-201ENST00000217260 KIF16BQ96L93 1317 aa23.25■■□□□ 1.31
RSPO4-201ENST00000217260 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
RSPO4-201ENST00000217260 FAM69CQ0P6D2 419 aa23.25■■□□□ 1.31
RSPO4-201ENST00000217260 TMEM57Q8N5G2 664 aa23.25■■□□□ 1.31
RSPO4-201ENST00000217260 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
RSPO4-201ENST00000217260 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
RSPO4-201ENST00000217260 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
RSPO4-201ENST00000217260 DLC1Q96QB1 1528 aa23.23■■□□□ 1.31
RSPO4-201ENST00000217260 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
RSPO4-201ENST00000217260 ATP7BP35670 1465 aa23.22■■□□□ 1.31
RSPO4-201ENST00000217260 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
RSPO4-201ENST00000217260 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
RSPO4-201ENST00000217260 FAM135BQ49AJ0 1406 aa23.21■■□□□ 1.31
RSPO4-201ENST00000217260 ALDH1L2Q3SY69 923 aa23.21■■□□□ 1.31
RSPO4-201ENST00000217260 RIMS2Q9UQ26 1411 aa23.21■■□□□ 1.31
RSPO4-201ENST00000217260 SLKQ9H2G2 1235 aaPredicted RBP23.21■■□□□ 1.31
RSPO4-201ENST00000217260 L1TD1Q5T7N2 865 aaKnown RBP23.2■■□□□ 1.3
RSPO4-201ENST00000217260 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
RSPO4-201ENST00000217260 HMOX1P09601 288 aa23.19■■□□□ 1.3
RSPO4-201ENST00000217260 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
RSPO4-201ENST00000217260 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
RSPO4-201ENST00000217260 AGLP35573 1532 aa23.17■■□□□ 1.3
RSPO4-201ENST00000217260 NFE2L2Q16236 605 aa23.17■■□□□ 1.3
RSPO4-201ENST00000217260 TBC1D2Q9BYX2 928 aa23.17■■□□□ 1.3
RSPO4-201ENST00000217260 EMILIN1Q9Y6C2 1016 aa23.17■■□□□ 1.3
RSPO4-201ENST00000217260 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
RSPO4-201ENST00000217260 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
RSPO4-201ENST00000217260 REREQ9P2R6 1566 aa23.16■■□□□ 1.3
RSPO4-201ENST00000217260 TSPOAP1O95153 1857 aa23.16■■□□□ 1.3
RSPO4-201ENST00000217260 MLECQ14165 292 aa23.16■■□□□ 1.3
RSPO4-201ENST00000217260 ZNF428Q96B54 188 aa23.16■■□□□ 1.3
RSPO4-201ENST00000217260 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
RSPO4-201ENST00000217260 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
RSPO4-201ENST00000217260 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
RSPO4-201ENST00000217260 WASLO00401 505 aaPredicted RBP23.15■■□□□ 1.3
RSPO4-201ENST00000217260 ANTXR1Q9H6X2 564 aa23.15■■□□□ 1.3
RSPO4-201ENST00000217260 EDC4Q6P2E9 1401 aaKnown RBP23.14■■□□□ 1.3
RSPO4-201ENST00000217260 NME9Q86XW9 330 aa23.14■■□□□ 1.3
RSPO4-201ENST00000217260 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.3
RSPO4-201ENST00000217260 RRAGDQ9NQL2 400 aaPredicted RBP23.14■■□□□ 1.3
RSPO4-201ENST00000217260 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
RSPO4-201ENST00000217260 PPIP5K1Q6PFW1 1433 aa23.14■■□□□ 1.29
RSPO4-201ENST00000217260 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
RSPO4-201ENST00000217260 MFAP1P55081 439 aaKnown RBP23.13■■□□□ 1.29
RSPO4-201ENST00000217260 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
RSPO4-201ENST00000217260 C22orf23Q9BZE7 217 aa23.13■■□□□ 1.29
RSPO4-201ENST00000217260 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
RSPO4-201ENST00000217260 IL13P35225 146 aa23.12■■□□□ 1.29
RSPO4-201ENST00000217260 VAMP4O75379 141 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms