RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.94■■■■□ 3.82
PABPN1-201ENST00000216727 CCDC27Q2M243 656 aa38.93■■■■□ 3.82
PABPN1-201ENST00000216727 AKAP12Q02952 1782 aa38.92■■■■□ 3.82
PABPN1-201ENST00000216727 PTCH1Q13635 1447 aa38.92■■■■□ 3.82
PABPN1-201ENST00000216727 CEP170BQ9Y4F5 1589 aaPredicted RBP38.91■■■■□ 3.82
PABPN1-201ENST00000216727 PRR36Q9H6K5 1346 aa38.91■■■■□ 3.82
PABPN1-201ENST00000216727 EXOC6Q8TAG9 804 aa38.9■■■■□ 3.82
PABPN1-201ENST00000216727 ZNF692Q9BU19 519 aaPredicted RBP38.9■■■■□ 3.82
PABPN1-201ENST00000216727 RIMS1Q86UR5 1692 aaKnown RBP38.88■■■■□ 3.82
PABPN1-201ENST00000216727 ITSN1Q15811 1721 aa38.88■■■■□ 3.81
PABPN1-201ENST00000216727 DMRT2Q9Y5R5 561 aa38.88■■■■□ 3.81
PABPN1-201ENST00000216727 AMOTL2Q9Y2J4 779 aa38.87■■■■□ 3.81
PABPN1-201ENST00000216727 TOPAZ1Q8N9V7 1692 aa38.86■■■■□ 3.81
PABPN1-201ENST00000216727 WDR63Q8IWG1 891 aa38.85■■■■□ 3.81
PABPN1-201ENST00000216727 NCKAP5LQ9HCH0 1330 aa38.85■■■■□ 3.81
PABPN1-201ENST00000216727 PLIN1O60240 522 aa38.85■■■■□ 3.81
PABPN1-201ENST00000216727 DIAPH1O60610 1272 aaKnown RBP38.83■■■■□ 3.81
PABPN1-201ENST00000216727 POLKQ9UBT6 870 aa38.82■■■■□ 3.8
PABPN1-201ENST00000216727 RRP7AQ9Y3A4 280 aaKnown RBP38.82■■■■□ 3.8
PABPN1-201ENST00000216727 PLEKHF1Q96S99 279 aa38.81■■■■□ 3.8
PABPN1-201ENST00000216727 AATKQ6ZMQ8 1374 aa38.81■■■■□ 3.8
PABPN1-201ENST00000216727 U2SURPO15042 1029 aaKnown RBP38.8■■■■□ 3.8
PABPN1-201ENST00000216727 PLEKHG3A1L390 1219 aa38.8■■■■□ 3.8
PABPN1-201ENST00000216727 NEUROD2Q15784 382 aa38.8■■■■□ 3.8
PABPN1-201ENST00000216727 NME9Q86XW9 330 aa38.8■■■■□ 3.8
PABPN1-201ENST00000216727 GOLGA6L2Q8N9W4 650 aaPredicted RBP38.8■■■■□ 3.8
PABPN1-201ENST00000216727 ADAMTSL3P82987 1691 aa38.8■■■■□ 3.8
PABPN1-201ENST00000216727 XRN1Q8IZH2 1706 aaKnown RBP38.79■■■■□ 3.8
PABPN1-201ENST00000216727 PIK3R4Q99570 1358 aa38.78■■■■□ 3.8
PABPN1-201ENST00000216727 MAP2P11137 1827 aaKnown RBP38.76■■■■□ 3.8
PABPN1-201ENST00000216727 PNNQ9H307 717 aaKnown RBP38.75■■■■□ 3.79
PABPN1-201ENST00000216727 ZNF142P52746 1687 aaPredicted RBP38.75■■■■□ 3.79
PABPN1-201ENST00000216727 COG3Q96JB2 828 aa38.74■■■■□ 3.79
PABPN1-201ENST00000216727 NRKQ7Z2Y5 1582 aa38.73■■■■□ 3.79
PABPN1-201ENST00000216727 CRBNQ96SW2 442 aa38.72■■■■□ 3.79
PABPN1-201ENST00000216727 RBM19Q9Y4C8 960 aaKnown RBP38.72■■■■□ 3.79
PABPN1-201ENST00000216727 CDK12Q9NYV4 1490 aaPredicted RBP38.71■■■■□ 3.79
PABPN1-201ENST00000216727 ACEP12821 1306 aa38.7■■■■□ 3.79
PABPN1-201ENST00000216727 MAPK8IP3Q9UPT6 1336 aa38.69■■■■□ 3.78
PABPN1-201ENST00000216727 DNAJC5Q9H3Z4 198 aa38.69■■■■□ 3.78
PABPN1-201ENST00000216727 FCHSD2O94868 740 aa38.68■■■■□ 3.78
PABPN1-201ENST00000216727 C20orf194Q5TEA3 1177 aa38.68■■■■□ 3.78
PABPN1-201ENST00000216727 ZRANB1Q9UGI0 708 aa38.68■■■■□ 3.78
PABPN1-201ENST00000216727 FBLN1P23142 703 aa38.67■■■■□ 3.78
PABPN1-201ENST00000216727 TMPOP42166 694 aaKnown RBP38.67■■■■□ 3.78
PABPN1-201ENST00000216727 USP6P35125 1406 aa38.67■■■■□ 3.78
PABPN1-201ENST00000216727 TTC21BQ7Z4L5 1316 aa38.67■■■■□ 3.78
PABPN1-201ENST00000216727 SETD1BQ9UPS6 1966 aaKnown RBP38.64■■■■□ 3.78
PABPN1-201ENST00000216727 PPM1GO15355 546 aaPredicted RBP38.64■■■■□ 3.78
PABPN1-201ENST00000216727 MYH16Q9H6N6 1097 aa38.64■■■■□ 3.78
PABPN1-201ENST00000216727 EMILIN1Q9Y6C2 1016 aa38.64■■■■□ 3.78
PABPN1-201ENST00000216727 ANKLE2Q86XL3 938 aa38.63■■■■□ 3.78
PABPN1-201ENST00000216727 SSH2Q76I76 1423 aa38.61■■■■□ 3.77
PABPN1-201ENST00000216727 NUTM2FA1L443 756 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 BCAR3O75815 825 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 LRRC7Q96NW7 1537 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 KCNA6P17658 529 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 OVOS2A0A0J9YW53 1432 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 OVOS2Q6IE36 1432 aa38.6■■■■□ 3.77
PABPN1-201ENST00000216727 TRIM35Q9UPQ4 493 aa38.59■■■■□ 3.77
PABPN1-201ENST00000216727 IL13P35225 146 aa38.58■■■■□ 3.77
PABPN1-201ENST00000216727 RSPH6AQ9H0K4 717 aa38.58■■■■□ 3.77
PABPN1-201ENST00000216727 ANKARQ7Z5J8 1434 aa38.57■■■■□ 3.76
PABPN1-201ENST00000216727 IL16Q14005 1332 aa38.56■■■■□ 3.76
PABPN1-201ENST00000216727 TTC21AQ8NDW8 1320 aa38.53■■■■□ 3.76
PABPN1-201ENST00000216727 NALCNQ8IZF0 1738 aa38.53■■■■□ 3.76
PABPN1-201ENST00000216727 CHD2O14647 1828 aaKnown RBP38.52■■■■□ 3.76
PABPN1-201ENST00000216727 RIPK4P57078 832 aa38.52■■■■□ 3.76
PABPN1-201ENST00000216727 RRS1Q15050 365 aaKnown RBP38.51■■■■□ 3.76
PABPN1-201ENST00000216727 PRKAR2BP31323 418 aa38.51■■■■□ 3.76
PABPN1-201ENST00000216727 RARSP54136 660 aaKnown RBP38.51■■■■□ 3.76
PABPN1-201ENST00000216727 PDE3AQ14432 1141 aa38.51■■■■□ 3.76
PABPN1-201ENST00000216727 USP31Q70CQ4 1352 aa38.5■■■■□ 3.75
PABPN1-201ENST00000216727 NEFMP07197 916 aa38.5■■■■□ 3.75
PABPN1-201ENST00000216727 CT47B1P0C2W7 299 aaPredicted RBP38.5■■■■□ 3.75
PABPN1-201ENST00000216727 RGPD8O14715 1765 aaPredicted RBP38.48■■■■□ 3.75
PABPN1-201ENST00000216727 FMN2Q9NZ56 1722 aa38.47■■■■□ 3.75
PABPN1-201ENST00000216727 PMFBP1Q8TBY8 1022 aa38.46■■■■□ 3.75
PABPN1-201ENST00000216727 FANCIQ9NVI1 1328 aa38.45■■■■□ 3.75
PABPN1-201ENST00000216727 NGDNQ8NEJ9 315 aaKnown RBP38.44■■■■□ 3.74
PABPN1-201ENST00000216727 HMOX1P09601 288 aa38.41■■■■□ 3.74
PABPN1-201ENST00000216727 NFE2L2Q16236 605 aa38.41■■■■□ 3.74
PABPN1-201ENST00000216727 PHACTR3Q96KR7 559 aa38.39■■■■□ 3.74
PABPN1-201ENST00000216727 KDM2BQ8NHM5 1336 aa38.38■■■■□ 3.73
PABPN1-201ENST00000216727 CANXP27824 592 aaKnown RBP38.37■■■■□ 3.73
PABPN1-201ENST00000216727 TSR2Q969E8 191 aaKnown RBP38.37■■■■□ 3.73
PABPN1-201ENST00000216727 NPHP4O75161 1426 aaPredicted RBP38.36■■■■□ 3.73
PABPN1-201ENST00000216727 TCERG1O14776 1098 aaKnown RBP38.33■■■■□ 3.73
PABPN1-201ENST00000216727 CENPQQ7L2Z9 268 aaPredicted RBP38.33■■■■□ 3.73
PABPN1-201ENST00000216727 PEAK1Q9H792 1746 aa38.33■■■■□ 3.73
PABPN1-201ENST00000216727 EIF4A2Q14240 407 aaKnown RBP38.33■■■■□ 3.73
PABPN1-201ENST00000216727 EXOSC9Q06265 439 aaKnown RBP38.32■■■■□ 3.72
PABPN1-201ENST00000216727 PIK3C2AO00443 1686 aa38.32■■■■□ 3.72
PABPN1-201ENST00000216727 CALD1Q05682 793 aaKnown RBP38.31■■■■□ 3.72
PABPN1-201ENST00000216727 FRAT1Q92837 279 aaPredicted RBP38.3■■■■□ 3.72
PABPN1-201ENST00000216727 ADGRL3Q9HAR2 1447 aa38.27■■■■□ 3.72
PABPN1-201ENST00000216727 USP54Q70EL1 1684 aa38.27■■■■□ 3.72
PABPN1-201ENST00000216727 AAMPQ13685 434 aa38.27■■■■□ 3.72
PABPN1-201ENST00000216727 LMOD3Q0VAK6 560 aa38.26■■■■□ 3.72
PABPN1-201ENST00000216727 PANK1Q8TE04 598 aa38.26■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms