RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 USP6P35125 1406 aa26.24■■□□□ 1.79
TNFRSF1A-201ENST00000162749 NME9Q86XW9 330 aa26.23■■□□□ 1.79
TNFRSF1A-201ENST00000162749 FKBP8Q14318 412 aa26.22■■□□□ 1.79
TNFRSF1A-201ENST00000162749 STRCP1A6NGW2 1772 aa26.22■■□□□ 1.79
TNFRSF1A-201ENST00000162749 PMFBP1Q8TBY8 1022 aa26.2■■□□□ 1.79
TNFRSF1A-201ENST00000162749 STRCQ7RTU9 1775 aa26.2■■□□□ 1.79
TNFRSF1A-201ENST00000162749 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
TNFRSF1A-201ENST00000162749 SSH2Q76I76 1423 aa26.19■■□□□ 1.78
TNFRSF1A-201ENST00000162749 TTC21BQ7Z4L5 1316 aa26.18■■□□□ 1.78
TNFRSF1A-201ENST00000162749 ZRANB1Q9UGI0 708 aa26.18■■□□□ 1.78
TNFRSF1A-201ENST00000162749 SALL2Q9Y467 1007 aaPredicted RBP26.18■■□□□ 1.78
TNFRSF1A-201ENST00000162749 COL3A1P02461 1466 aaPredicted RBP26.17■■□□□ 1.78
TNFRSF1A-201ENST00000162749 NGDNQ8NEJ9 315 aaKnown RBP26.15■■□□□ 1.78
TNFRSF1A-201ENST00000162749 COG3Q96JB2 828 aa26.15■■□□□ 1.78
TNFRSF1A-201ENST00000162749 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.78
TNFRSF1A-201ENST00000162749 FBLN1P23142 703 aa26.14■■□□□ 1.77
TNFRSF1A-201ENST00000162749 C14orf37Q86TY3 774 aa26.13■■□□□ 1.77
TNFRSF1A-201ENST00000162749 CCDC146Q8IYE0 955 aa26.13■■□□□ 1.77
TNFRSF1A-201ENST00000162749 PNPLA6Q8IY17 1366 aa26.13■■□□□ 1.77
TNFRSF1A-201ENST00000162749 PROSER2Q86WR7 435 aaPredicted RBP26.12■■□□□ 1.77
TNFRSF1A-201ENST00000162749 OVOS2A0A0J9YW53 1432 aa26.12■■□□□ 1.77
TNFRSF1A-201ENST00000162749 OVOS2Q6IE36 1432 aa26.12■■□□□ 1.77
TNFRSF1A-201ENST00000162749 AATKQ6ZMQ8 1374 aa26.12■■□□□ 1.77
TNFRSF1A-201ENST00000162749 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
TNFRSF1A-201ENST00000162749 NUDCQ9Y266 331 aa26.1■■□□□ 1.77
TNFRSF1A-201ENST00000162749 PIK3C2AO00443 1686 aa26.1■■□□□ 1.77
TNFRSF1A-201ENST00000162749 TTC21AQ8NDW8 1320 aa26.1■■□□□ 1.77
TNFRSF1A-201ENST00000162749 NEFLP07196 543 aa26.09■■□□□ 1.77
TNFRSF1A-201ENST00000162749 PDE3BQ13370 1112 aa26.07■■□□□ 1.76
TNFRSF1A-201ENST00000162749 PHF8Q9UPP1 1060 aa26.07■■□□□ 1.76
TNFRSF1A-201ENST00000162749 APAF1O14727 1248 aa26.06■■□□□ 1.76
TNFRSF1A-201ENST00000162749 EMILIN1Q9Y6C2 1016 aa26.06■■□□□ 1.76
TNFRSF1A-201ENST00000162749 CDK12Q9NYV4 1490 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF1A-201ENST00000162749 MARF1Q9Y4F3 1742 aaKnown RBP26.04■■□□□ 1.76
TNFRSF1A-201ENST00000162749 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
TNFRSF1A-201ENST00000162749 PPM1GO15355 546 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF1A-201ENST00000162749 U2AF1L5P0DN76 240 aaPredicted RBP26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 U2AF1Q01081 240 aaKnown RBP eCLIP26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 C19orf44Q9H6X5 657 aa26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 DIAPH1O60610 1272 aaKnown RBP26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 ZNF521Q96K83 1311 aa26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 XIRP1Q702N8 1843 aaKnown RBP26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 USP31Q70CQ4 1352 aa26.03■■□□□ 1.76
TNFRSF1A-201ENST00000162749 RRS1Q15050 365 aaKnown RBP26.02■■□□□ 1.76
TNFRSF1A-201ENST00000162749 ESCO1Q5FWF5 840 aa26.02■■□□□ 1.76
TNFRSF1A-201ENST00000162749 IQSEC2Q5JU85 1478 aa26.02■■□□□ 1.76
TNFRSF1A-201ENST00000162749 CDCA7LQ96GN5 454 aa26.02■■□□□ 1.76
TNFRSF1A-201ENST00000162749 RUNDC1Q96C34 613 aa26.01■■□□□ 1.75
TNFRSF1A-201ENST00000162749 NCOA3Q9Y6Q9 1424 aa26.01■■□□□ 1.75
TNFRSF1A-201ENST00000162749 U2SURPO15042 1029 aaKnown RBP26■■□□□ 1.75
TNFRSF1A-201ENST00000162749 DCCP43146 1447 aa25.98■■□□□ 1.75
TNFRSF1A-201ENST00000162749 ORAI2Q96SN7 254 aa25.98■■□□□ 1.75
TNFRSF1A-201ENST00000162749 PEAK1Q9H792 1746 aa25.97■■□□□ 1.75
TNFRSF1A-201ENST00000162749 NGEFQ8N5V2 710 aa25.97■■□□□ 1.75
TNFRSF1A-201ENST00000162749 C1orf167Q5SNV9 1468 aa25.97■■□□□ 1.75
TNFRSF1A-201ENST00000162749 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
TNFRSF1A-201ENST00000162749 TCP11L2Q8N4U5 519 aa25.95■■□□□ 1.75
TNFRSF1A-201ENST00000162749 LRRC7Q96NW7 1537 aa25.94■■□□□ 1.74
TNFRSF1A-201ENST00000162749 NLRP6P59044 892 aa25.94■■□□□ 1.74
TNFRSF1A-201ENST00000162749 MST1RQ04912 1400 aa25.93■■□□□ 1.74
TNFRSF1A-201ENST00000162749 PAK3O75914 559 aaPredicted RBP25.93■■□□□ 1.74
TNFRSF1A-201ENST00000162749 ABTB2Q8N961 1025 aa25.93■■□□□ 1.74
TNFRSF1A-201ENST00000162749 PLEKHF1Q96S99 279 aa25.93■■□□□ 1.74
TNFRSF1A-201ENST00000162749 IL13P35225 146 aa25.92■■□□□ 1.74
TNFRSF1A-201ENST00000162749 PSME1Q06323 249 aa25.92■■□□□ 1.74
TNFRSF1A-201ENST00000162749 GOLGA2Q08379 1002 aa25.92■■□□□ 1.74
TNFRSF1A-201ENST00000162749 SOX12O15370 315 aa25.91■■□□□ 1.74
TNFRSF1A-201ENST00000162749 ATF3P18847 181 aa25.91■■□□□ 1.74
TNFRSF1A-201ENST00000162749 FOXO3O43524 673 aa25.9■■□□□ 1.74
TNFRSF1A-201ENST00000162749 TSHZ2Q9NRE2 1034 aa25.9■■□□□ 1.74
TNFRSF1A-201ENST00000162749 TRPM3Q9HCF6 1732 aaPredicted RBP25.9■■□□□ 1.74
TNFRSF1A-201ENST00000162749 NUTM2GQ5VZR2 741 aa25.9■■□□□ 1.74
TNFRSF1A-201ENST00000162749 RRP7AQ9Y3A4 280 aaKnown RBP25.9■■□□□ 1.74
TNFRSF1A-201ENST00000162749 ZNF335Q9H4Z2 1342 aaPredicted RBP25.89■■□□□ 1.74
TNFRSF1A-201ENST00000162749 NEUROD2Q15784 382 aa25.88■■□□□ 1.73
TNFRSF1A-201ENST00000162749 WWC1Q8IX03 1113 aa25.88■■□□□ 1.73
TNFRSF1A-201ENST00000162749 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
TNFRSF1A-201ENST00000162749 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
TNFRSF1A-201ENST00000162749 FCHSD2O94868 740 aa25.87■■□□□ 1.73
TNFRSF1A-201ENST00000162749 MSH6P52701 1360 aa25.87■■□□□ 1.73
TNFRSF1A-201ENST00000162749 DUSP27Q5VZP5 1158 aa25.87■■□□□ 1.73
TNFRSF1A-201ENST00000162749 CADPS2Q86UW7 1296 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 RSPH6AQ9H0K4 717 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 LTN1O94822 1766 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 RNF123Q5XPI4 1314 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 SLFN5Q08AF3 891 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 DMRT2Q9Y5R5 561 aa25.86■■□□□ 1.73
TNFRSF1A-201ENST00000162749 NCBP3Q53F19 620 aaKnown RBP25.85■■□□□ 1.73
TNFRSF1A-201ENST00000162749 SPINK5Q9NQ38 1064 aaPredicted RBP25.85■■□□□ 1.73
TNFRSF1A-201ENST00000162749 SBNO1A3KN83 1393 aa25.85■■□□□ 1.73
TNFRSF1A-201ENST00000162749 RGPD1P0DJD0 1748 aa25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 MAPK8IP3Q9UPT6 1336 aa25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 IRX6P78412 446 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 CCDC27Q2M243 656 aa25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 PNNQ9H307 717 aaKnown RBP25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 XPCQ01831 940 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 HSP90AB2PQ58FF8 381 aa25.84■■□□□ 1.73
TNFRSF1A-201ENST00000162749 FLT4P35916 1363 aa25.83■■□□□ 1.73
TNFRSF1A-201ENST00000162749 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms