RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Tnpo1Q8BFY9 898 aaKnown RBP14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Nphp1Q9QY53 687 aa14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 TbcaP48428 108 aaKnown RBP14.03□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Prpf4bQ61136 1007 aaKnown RBP14.02□□□□□ -0.16
Scn8a-208ENSMUST00000200963 Cep112Q5PR68 954 aa14.02□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Pde4cQ3UEI1 686 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Kiaa0753Q6A000 959 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Q7TT23 1179 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Cabp2Q9JLK4 216 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Stard3nlQ9DCI3 235 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Evi5lH3BKQ3 813 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Ppp2r1aQ76MZ3 589 aa14.01□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Pknox2Q8BG99 474 aa14□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Sycp2Q9CUU3 1500 aa14□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Cavin4A2AMM0 362 aa14□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Tango6Q8C3S2 1079 aa14□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Nop14Q8R3N1 860 aaKnown RBP14□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Ccar2Q8VDP4 922 aaKnown RBP13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Ankrd36D3Z4K0 1415 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Cecr2E9Q2Z1 1453 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Apaf1O88879 1249 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Erlin2Q8BFZ9 340 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Zkscan1Q8BGS3 561 aaKnown RBP13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Olfml1Q8BSH2 233 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 TnmdQ9EP64 317 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 CenphQ9QYM8 241 aa13.99□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Lrrc45Q8CIM1 670 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Ddx54Q8K4L0 874 aaKnown RBP13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Rbm10Q99KG3 930 aaKnown RBP13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Gm21698A0A087WQP8 267 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Gm21671G3UY31 267 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Pip4k2aO70172 405 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Slc13a4Q8BZ82 625 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Ell2Q3UKU1 639 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Abcd1P48410 736 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Bag1Q60739 355 aa13.98□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Cnnm3Q32NY4 713 aa13.97□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Dennd6aQ8BH65 605 aa13.97□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Kdm4aQ8BW72 1064 aa13.97□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Rab3gap2Q8BMG7 1366 aa13.97□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Secisbp2lQ6A098 1086 aaKnown RBP13.97□□□□□ -0.17
Scn8a-208ENSMUST00000200963 MycnP03966 462 aaKnown RBP13.96□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Stim1P70302 685 aa13.96□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Jakmip1Q8BVL9 626 aa13.96□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Cwc27Q3TKY6 469 aa13.96□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Def6Q8C2K1 630 aa13.96□□□□□ -0.17
Scn8a-208ENSMUST00000200963 Gcc1Q9D4H2 778 aa13.96□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Mapk8ip1Q9WVI9 707 aa13.96□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Zfp644E9QA22 1323 aa13.96□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Znf771Q8BJ90 317 aa13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Speer4bQ9D9F7 267 aa13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Arhgap5P97393 1501 aa13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 ItpripQ3TNL8 555 aa13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Larp1Q6ZQ58 1072 aaKnown RBP13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ttc19Q8CC21 365 aa13.95□□□□□ -0.18
Scn8a-208ENSMUST00000200963 PsapQ61207 557 aaKnown RBP13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ssr1Q9CY50 286 aaKnown RBP13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Eif3aP23116 1344 aaKnown RBP13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Mctp1E9PV86 951 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Luc7lQ9CYI4 371 aaKnown RBP13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm21663A0A0G2JE01 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm7361D3Z6R1 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 5031410I06RikE9Q4E0 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm1979E9QAN3 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm5862K7N5V5 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gm10220K7N660 267 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Fsd1Q7TPM6 496 aa13.94□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Trim30cD3YVI9 513 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Srgap3Q812A2 1099 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cog6Q8R3I3 657 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cd109Q8R422 1442 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Trim34bJ3QNR8 485 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Krt85Q9Z2T6 507 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Eif5P59325 429 aaKnown RBP13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Zfp444Q3TDV8 331 aaKnown RBP13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Golim4Q8BXA1 655 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Plcd4Q8K3R3 807 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Prdm16A2A935 1275 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Exoc6bA6H5Z3 810 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ccdc102aQ3TMW1 549 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Tubb6Q922F4 447 aa13.93□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Kcnj4P52189 445 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Lamb3Q61087 1168 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Zscan20B2KFW1 1030 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Dnajc2P54103 621 aaKnown RBP13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cdc45Q9Z1X9 566 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ift140E9PY46 1464 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Map3k5O35099 1380 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ripply1Q2WG77 201 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Frmd3Q8BHD4 595 aa13.92□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Map3k13Q1HKZ5 959 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Spty2d1Q68FG3 682 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Nol7Q9D7Z3 254 aaKnown RBP13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cyp26c1B2RXA7 518 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Dhx8A2A4P0 1244 aaKnown RBP13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Gbp4Q61107 620 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Ercc6lQ8BHK9 1240 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Cdk19Q8BWD8 501 aa13.91□□□□□ -0.18
Scn8a-208ENSMUST00000200963 Rhot2Q8JZN7 620 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms