RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Utp14aQ640M1 767 aaKnown RBP17.83■□□□□ 0.45
Shank1-202ENSMUST00000107935 Pde1cQ64338 706 aa17.83■□□□□ 0.45
Shank1-202ENSMUST00000107935 ClasrpQ8CFC7 668 aa17.83■□□□□ 0.45
Shank1-202ENSMUST00000107935 Gm18336A0A140LIU8 765 aa17.83■□□□□ 0.45
Shank1-202ENSMUST00000107935 Fez2Q6TYB5 348 aa17.83■□□□□ 0.44
Shank1-202ENSMUST00000107935 Map2k1P31938 393 aa17.83■□□□□ 0.44
Shank1-202ENSMUST00000107935 Dydc1Q9D9T0 175 aa17.83■□□□□ 0.44
Shank1-202ENSMUST00000107935 CrcpO35427 148 aa17.83■□□□□ 0.44
Shank1-202ENSMUST00000107935 Prpf4bQ61136 1007 aaKnown RBP17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 ImpactO55091 318 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Trap1aP19473 224 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Tango6Q8C3S2 1079 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Dhx16G3X8X0 1044 aaKnown RBP17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Uri1Q3TLD5 531 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Znf704Q9ERQ3 566 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 LarsQ8BMJ2 1178 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Slc4a2P13808 1237 aaKnown RBP17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Paxbp1P58501 919 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 Smc1bQ920F6 1248 aa17.82■□□□□ 0.44
Shank1-202ENSMUST00000107935 NacadQ5SWP3 1504 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Cog6Q8R3I3 657 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Tmem132aQ922P8 1018 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Mcm4P49717 862 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Ccdc171E9Q1U1 1324 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Larp1Q6ZQ58 1072 aaKnown RBP17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Rpap1Q80TE0 1409 aa17.81■□□□□ 0.44
Shank1-202ENSMUST00000107935 Zfp444Q3TDV8 331 aaKnown RBP17.8■□□□□ 0.44
Shank1-202ENSMUST00000107935 Maats1Q8BRC6 783 aa17.8■□□□□ 0.44
Shank1-202ENSMUST00000107935 Map3k7clP58500 142 aa17.8■□□□□ 0.44
Shank1-202ENSMUST00000107935 Tmc1Q8R4P5 757 aa17.8■□□□□ 0.44
Shank1-202ENSMUST00000107935 Jakmip3Q5DTN8 844 aa17.79■□□□□ 0.44
Shank1-202ENSMUST00000107935 Nf2P46662 596 aa17.79■□□□□ 0.44
Shank1-202ENSMUST00000107935 Dnajc2P54103 621 aaKnown RBP17.79■□□□□ 0.44
Shank1-202ENSMUST00000107935 Swt1Q9DBQ9 907 aa17.79■□□□□ 0.44
Shank1-202ENSMUST00000107935 Gcc1Q9D4H2 778 aa17.79■□□□□ 0.44
Shank1-202ENSMUST00000107935 Usp40Q8BWR4 1235 aa17.78■□□□□ 0.44
Shank1-202ENSMUST00000107935 Kif18aQ91WD7 886 aa17.78■□□□□ 0.44
Shank1-202ENSMUST00000107935 Ankrd36D3Z4K0 1415 aa17.78■□□□□ 0.44
Shank1-202ENSMUST00000107935 Hspa4Q61316 841 aa17.78■□□□□ 0.44
Shank1-202ENSMUST00000107935 Ppp4r3bQ922R5 820 aa17.78■□□□□ 0.44
Shank1-202ENSMUST00000107935 NmiO35309 314 aa17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Eif5P59325 429 aaKnown RBP17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Gm10471E9Q1C7 252 aa17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Sass6Q80UK7 654 aa17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Tax1bp1Q3UKC1 814 aaKnown RBP17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Wdr33Q8K4P0 1330 aaKnown RBP17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Pafah1b1P63005 410 aaKnown RBP17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Acbd3Q8BMP6 525 aa17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 AknaQ80VW7 1404 aa17.77■□□□□ 0.44
Shank1-202ENSMUST00000107935 Themis2Q91YX0 663 aa17.77■□□□□ 0.43
Shank1-202ENSMUST00000107935 Tubb6Q922F4 447 aa17.77■□□□□ 0.43
Shank1-202ENSMUST00000107935 Stim1P70302 685 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Sv2bQ8BG39 683 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Erlin1Q91X78 346 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cavin1O54724 392 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Bbof1Q3V079 533 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Erc1Q99MI1 1120 aa17.76■□□□□ 0.43
Shank1-202ENSMUST00000107935 Mnat1P51949 309 aa17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ccnb3Q810T2 1396 aa17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 Als2cr12Q8BVM7 383 aa17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 SrrtQ99MR6 875 aaKnown RBP17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cep89Q9CZX2 791 aa17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 TxlnaQ6PAM1 554 aaKnown RBP17.75■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ccdc73Q8CDM4 1066 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Serpina10Q8R121 448 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Odf2lQ9D478 642 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Dhx57Q6P5D3 1388 aaKnown RBP17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Jade2Q6ZQF7 829 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Skor1Q8BX46 964 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Lrrc45Q8CIM1 670 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ccdc39Q9D5Y1 937 aa17.74■□□□□ 0.43
Shank1-202ENSMUST00000107935 Spata24Q6P926 205 aa17.73■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cfap45Q9D9U9 551 aa17.73■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ccdc94Q9D6J3 314 aa17.73■□□□□ 0.43
Shank1-202ENSMUST00000107935 Txndc2Q6P902 515 aa17.73■□□□□ 0.43
Shank1-202ENSMUST00000107935 Zeb2Q9R0G7 1215 aa17.73■□□□□ 0.43
Shank1-202ENSMUST00000107935 Jakmip1Q8BVL9 626 aa17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ccdc191J3QQ27 883 aa17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Tspyl3Q3UYP3 334 aa17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Ctr9Q62018 1173 aaKnown RBP17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Lrrcc1Q69ZB0 1026 aa17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Dhx29Q6PGC1 1365 aaKnown RBP17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cep57l1Q8VDS7 400 aa17.72■□□□□ 0.43
Shank1-202ENSMUST00000107935 Rbm28Q8CGC6 750 aaKnown RBP17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cep135Q6P5D4 1140 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Mipol1Q9D9F8 279 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Tfip11Q9ERA6 838 aaKnown RBP17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Serpinb6bO08804 377 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Gm21671G3UY31 267 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cfdp1O88271 295 aaKnown RBP17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Kif2aP28740 705 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Erich4Q3UNU4 136 aa17.71■□□□□ 0.43
Shank1-202ENSMUST00000107935 Cpa2Q504N0 417 aa17.71■□□□□ 0.42
Shank1-202ENSMUST00000107935 Adck5Q80V03 582 aa17.7■□□□□ 0.42
Shank1-202ENSMUST00000107935 Cabp4Q8VHC5 271 aa17.7■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ppp6r1Q7TSI3 856 aa17.7■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ccdc112A0AUP1 442 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Ercc3P49135 783 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Adcy5P84309 1262 aa17.69■□□□□ 0.42
Shank1-202ENSMUST00000107935 Abcf1Q6P542 837 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms