RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Rwdd1Q9CQK7 243 aa15.85■□□□□ 0.13
Vamp1-203ENSMUST00000100942 FanciQ8K368 1330 aa15.85■□□□□ 0.13
Vamp1-203ENSMUST00000100942 Txndc2Q6P902 515 aa15.84■□□□□ 0.13
Vamp1-203ENSMUST00000100942 Spryd3E9Q9B3 442 aa15.84■□□□□ 0.13
Vamp1-203ENSMUST00000100942 Slit3Q9WVB4 1523 aa15.83■□□□□ 0.13
Vamp1-203ENSMUST00000100942 Map3k19E9Q3S4 1311 aa15.83■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Znf692Q3U381 531 aa15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Gas2l2Q5SSG4 860 aa15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Mbd3Q9Z2D8 285 aaKnown RBP15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Tsen2Q6P7W5 460 aa15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Usp32F8VPZ3 1604 aa15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Cps1Q8C196 1500 aa15.82■□□□□ 0.12
Vamp1-203ENSMUST00000100942 4930567H17RikQ3V0K5 233 aa15.81■□□□□ 0.12
Vamp1-203ENSMUST00000100942 U2af1Q9D883 239 aaKnown RBP15.8■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Ttll13A4Q9F6 804 aa15.8■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Apaf1O88879 1249 aa15.79■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Atxn3Q9CVD2 355 aa15.79■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Gtf2a1Q99PM3 378 aa15.78■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Pik3c2bE9QAN8 1632 aa15.78■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Dip2bQ3UH60 1574 aa15.78■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Ncbp3Q8BZR9 615 aaKnown RBP15.78■□□□□ 0.12
Vamp1-203ENSMUST00000100942 Tnrc6bQ8BKI2 1810 aaKnown RBP15.77■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Nkx1-2P42580 305 aa15.76■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Kif1aP33173 1695 aa15.76■□□□□ 0.11
Vamp1-203ENSMUST00000100942 PtpruB1AUH1 1446 aa15.76■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Armcx1Q9CX83 456 aa15.76■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Mre11Q61216 706 aa15.75■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Plppr3Q7TPB0 716 aa15.75■□□□□ 0.11
Vamp1-203ENSMUST00000100942 PzpQ61838 1495 aa15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Safb2Q80YR5 991 aaKnown RBP15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Arap3Q8R5G7 1538 aa15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Kdm2bQ6P1G2 1309 aa15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Trim28Q62318 834 aa15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Idi2Q8BFZ6 227 aa15.74■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Znf541Q0GGX2 1363 aa15.73■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Trim30dE9PWL0 497 aa15.72■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Pik3r4Q8VD65 1358 aa15.72■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Rangap1P46061 589 aaKnown RBP15.72■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Pdlim2Q8R1G6 349 aa15.72■□□□□ 0.11
Vamp1-203ENSMUST00000100942 AU015836B2RUM3 263 aa15.71■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Dusp27Q148W8 1138 aa15.71■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Znf316Q6PGE4 1016 aa15.71■□□□□ 0.11
Vamp1-203ENSMUST00000100942 Slc12a5Q91V14 1138 aa15.71■□□□□ 0.11
Vamp1-203ENSMUST00000100942 HnrnpmQ9D0E1 729 aaKnown RBP15.71■□□□□ 0.11
Vamp1-203ENSMUST00000100942 N4bp2F8VQG7 1678 aaKnown RBP15.7■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Uhrf1bp1B2KF50 1429 aa15.7■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Chd4Q6PDQ2 1915 aaKnown RBP15.69■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Eif2s2Q99L45 331 aaKnown RBP15.69■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Rreb1Q3UH06 1700 aaKnown RBP15.69■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Ecm2Q5FW85 670 aa15.68■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Rrp9Q91WM3 475 aaKnown RBP15.68■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Zmym3Q9JLM4 1370 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Znf521Q6KAS7 1311 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Mapk8ip3Q9ESN9 1337 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 CatipB9EKE5 520 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Ksr2Q3UVC0 959 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Dnai1Q8C0M8 701 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Ciz1Q8VEH2 845 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 PalmQ9Z0P4 383 aa15.67■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Cavin4A2AMM0 362 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Ppp1r15aP17564 657 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Q4VA45 678 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Sirt1Q923E4 737 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Chmp5Q9D7S9 219 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 D430041D05RikF6ZGR6 1678 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Fchsd2Q3USJ8 740 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Tspyl2Q7TQI8 677 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Polr3glQ8R0C0 218 aa15.66■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Pank1Q8K4K6 548 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 4930407I10RikD3Z5T8 1512 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Spef2Q8C9J3 1734 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Birc3O08863 600 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Fam135bQ9DAI6 1403 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 PaskQ8CEE6 1383 aa15.65■□□□□ 0.1
Vamp1-203ENSMUST00000100942 Uhrf1bp1lA2RSJ4 1457 aa15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Kif20bQ80WE4 1774 aaKnown RBP15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Trim58Q5NCC9 485 aa15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Ppm1gQ61074 542 aa15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Taok2Q6ZQ29 1240 aa15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Ccar1Q8CH18 1146 aaKnown RBP15.64■□□□□ 0.09
Vamp1-203ENSMUST00000100942 AampJ3QN89 436 aa15.63■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Q3UJC8 639 aa15.63■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Rtn4Q99P72 1162 aaKnown RBP15.63■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Gm6268A2A3U9 297 aa15.63■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Trim26Q99PN3 545 aa15.62■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Atp7bQ64446 1462 aa15.62■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Ttc21aQ8C0S4 1314 aa15.62■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Hoxb7P09024 217 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 C5P06684 1680 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Als2Q920R0 1651 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Mdc1Q5PSV9 1707 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Bcl9Q9D219 1425 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 NalcnQ8BXR5 1738 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Hsp90ab1P11499 724 aaKnown RBP15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Smc5Q8CG46 1101 aaKnown RBP15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Ankrd50F7BE84 1390 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Lmtk3Q5XJV6 1424 aa15.61■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Mon2Q80TL7 1715 aa15.6■□□□□ 0.09
Vamp1-203ENSMUST00000100942 CastP51125 788 aa15.6■□□□□ 0.09
Vamp1-203ENSMUST00000100942 Med1Q925J9 1575 aa15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms