RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Usp6nlQ80XC3 819 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Tut1Q8R3F9 869 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Fam114a1Q9D281 569 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Copb2O55029 905 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Pde4dQ01063 747 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Gabbr1Q9WV18 960 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Fam184aE9PW83 1143 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Nudcd3Q8R1N4 363 aa10.78□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Odf2A3KGV1 830 aaKnown RBP10.77□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Cspp1B2RX88 1205 aa10.77□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Smad5P97454 465 aa10.77□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Ttc1Q91Z38 292 aa10.77□□□□□ -0.68
Clcn3-202ENSMUST00000056508 Tacc3Q9JJ11 631 aa10.77□□□□□ -0.68
Clcn3-202ENSMUST00000056508 CastP51125 788 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 G3bp2P97379 482 aaKnown RBP10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 4930572O03RikQ8C5Y0 211 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Mybpc2Q5XKE0 1136 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Sept6Q9R1T4 434 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Camk4P08414 469 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 NfrkbQ6PIJ4 1296 aaKnown RBP10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Rassf8Q8CJ96 419 aa10.77□□□□□ -0.69
Clcn3-202ENSMUST00000056508 IbspQ61711 324 aa10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 AmotQ8VHG2 1126 aa10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Krt82Q99M74 516 aa10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Mink1Q9JM52 1308 aa10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Bin1O08539 588 aaKnown RBP10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 MrgbpQ9DAT2 204 aa10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Cwc15Q9JHS9 229 aaKnown RBP10.76□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Hnrnpul2Q00PI9 745 aaKnown RBP10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Chpf2Q3UU43 768 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Iqcf4Q6P8Y2 204 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Kdm4cQ8VCD7 1054 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 HellsQ60848 821 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ube2q1Q7TSS2 422 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ccdc186Q8C9S4 917 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Atg3Q9CPX6 314 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Nkx2-3P97334 362 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Tpp2Q64514 1262 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Col4a3bpQ9EQG9 624 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ccdc102aQ3TMW1 549 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Pdcl2Q78Y63 240 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Tmco3Q8BH01 678 aa10.75□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ankrd33bQ3U0L2 486 aa10.74□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Odr4Q4PJX1 447 aa10.74□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Fez1Q8K0X8 392 aa10.74□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Stk11Q9WTK7 436 aa10.74□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ift74Q8BKE9 600 aa10.74□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Inpp5fQ8CDA1 1132 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Hnrnpul1Q8VDM6 859 aaKnown RBP10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Tpm3P21107 285 aaKnown RBP10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 HalP35492 657 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 EspnQ9ET47 871 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ankrd49Q8VE42 238 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Mapk8Q91Y86 384 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Slc5a4bQ91ZP4 660 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Gm18336A0A140LIU8 765 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Cald1E9QA15 768 aaKnown RBP10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Trappc10Q3TLI0 1259 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Wdr3Q8BHB4 942 aaKnown RBP10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Def6Q8C2K1 630 aa10.73□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Uri1Q3TLD5 531 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Gm21969J3QJZ1 289 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Iffo2Q8R2V2 512 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Stk31Q99MW1 1018 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Clec4gQ8BNX1 294 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Znf467Q8JZL0 594 aa10.72□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Csrnp3P59055 597 aa10.71□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ksr2Q3UVC0 959 aa10.71□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Armc3A2AU72 881 aa10.71□□□□□ -0.69
Clcn3-202ENSMUST00000056508 ChkbO55229 394 aa10.71□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Ubxn4Q8VCH8 506 aa10.71□□□□□ -0.69
Clcn3-202ENSMUST00000056508 Kcng1A2BDX4 514 aa10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Prpf40aQ9R1C7 953 aaKnown RBP10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Ccdc180J3QNE4 1664 aa10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Myl1P05977 188 aa10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 TchpQ3TVW5 497 aa10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Grwd1Q810D6 446 aaKnown RBP10.71□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Kif7B7ZNG0 1348 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Kiaa0754Q69ZZ9 979 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 FlcnQ8QZS3 579 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Psmd2Q8VDM4 908 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Pnma2Q8BHK0 365 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Timm44O35857 452 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Neurod6P48986 337 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Ppp1r9aH3BJD6 1292 aa10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Swap70Q6A028 585 aaKnown RBP10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Tex2Q6ZPJ0 1128 aaKnown RBP10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Brd3Q8K2F0 726 aaKnown RBP10.7□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Atl2Q6PA06 583 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Nop9Q8BMC4 636 aaKnown RBP10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Amotl2Q8K371 772 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 MycbpQ9EQS3 103 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Ccdc39Q9D5Y1 937 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Shq1Q7TMX5 569 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Rpgrip1lQ8CG73 1264 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Armcx1Q9CX83 456 aa10.69□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Ccdc158Q8CDI6 1109 aa10.68□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Smc4Q8CG47 1286 aa10.68□□□□□ -0.7
Clcn3-202ENSMUST00000056508 SrrtQ99MR6 875 aaKnown RBP10.68□□□□□ -0.7
Clcn3-202ENSMUST00000056508 Shtn1Q8K2Q9 631 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms