RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Ccnl1Q52KE7 532 aaKnown RBP13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 B4galnt3Q6L8S8 986 aa13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 St5Q924W7 1134 aa13.14□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ccp110Q7TSH4 1004 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 InhbeO08717 350 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ifit1bl2Q3U687 466 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 VeztQ3ZK22 780 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 Tmem132eQ6IEE6 982 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ric3Q8BPM6 367 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 BC005561E9Q5E2 1589 aa13.13□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ripk4Q9ERK0 786 aa13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ggnbp2Q5SV77 696 aa13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 Podxl2Q8CAE9 603 aa13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 UvssaQ9D479 717 aa13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 PsapQ61207 557 aaKnown RBP13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 Gm38655A0A286YDK6 273 aa13.12□□□□□ -0.31
Limch1-201ENSMUST00000038188 Magi3Q9EQJ9 1476 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Nectin2P32507 530 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 4930567H17RikQ3V0K5 233 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 CanxP35564 591 aaKnown RBP13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 PalmQ9Z0P4 383 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Triml2E9PW10 424 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ccdc146E9Q9F7 977 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ccdc47Q9D024 483 aaKnown RBP13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Pde4dQ01063 747 aa13.11□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ankrd26Q811D2 1581 aa13.1□□□□□ -0.31
Limch1-201ENSMUST00000038188 Abcc2Q8VI47 1543 aa13.1□□□□□ -0.31
Limch1-201ENSMUST00000038188 GlmnQ8BZM1 596 aa13.1□□□□□ -0.31
Limch1-201ENSMUST00000038188 Rbm25B2RY56 838 aaKnown RBP13.1□□□□□ -0.31
Limch1-201ENSMUST00000038188 PtmaP26350 111 aa13.1□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ano8Q6PB70 1060 aa13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 PtprgQ05909 1442 aa13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 Kif24Q6NWW5 1356 aa13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 IbtkQ6ZPR6 1352 aaKnown RBP13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 Prl7d1P04769 244 aa13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 Ttll12Q3UDE2 639 aa13.09□□□□□ -0.31
Limch1-201ENSMUST00000038188 IkQ9Z1M8 557 aaKnown RBP13.08□□□□□ -0.31
Limch1-201ENSMUST00000038188 Wdr43Q6ZQL4 677 aaKnown RBP13.08□□□□□ -0.32
Limch1-201ENSMUST00000038188 Esx1O88933 382 aa13.08□□□□□ -0.32
Limch1-201ENSMUST00000038188 Ppp1r1bQ60829 194 aa13.08□□□□□ -0.32
Limch1-201ENSMUST00000038188 Armc3A2AU72 881 aa13.08□□□□□ -0.32
Limch1-201ENSMUST00000038188 Dnajc10Q9DC23 793 aa13.07□□□□□ -0.32
Limch1-201ENSMUST00000038188 Znf608Q56A10 1511 aa13.07□□□□□ -0.32
Limch1-201ENSMUST00000038188 Ginm1Q91WR6 327 aa13.07□□□□□ -0.32
Limch1-201ENSMUST00000038188 TmpoQ61033 693 aaKnown RBP13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 Nip7Q9CXK8 180 aaKnown RBP13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 NppbP40753 121 aa13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 IncenpQ9WU62 880 aa13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 Pm20d1Q8C165 503 aa13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 RtcbQ99LF4 505 aaKnown RBP13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 Mex3cQ05A36 652 aaKnown RBP13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 Sgsm1Q8BPQ7 1093 aa13.06□□□□□ -0.32
Limch1-201ENSMUST00000038188 Talpid3E9PV87 1520 aa13.05□□□□□ -0.32
Limch1-201ENSMUST00000038188 Atp10aO54827 1508 aa13.05□□□□□ -0.32
Limch1-201ENSMUST00000038188 Exoc6bA6H5Z3 810 aa13.05□□□□□ -0.32
Limch1-201ENSMUST00000038188 Apaf1O88879 1249 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Prrc2bQ7TPM1 1486 aaKnown RBP13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 TnikP83510 1323 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Washc4Q3UMB9 1173 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Fkbp5Q64378 456 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Znf18Q810A1 556 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Paf1Q8K2T8 535 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Kri1Q8VDQ9 704 aaKnown RBP13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Fndc1E9Q043 1732 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 PzpQ61838 1495 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Naip5Q9R016 1403 aa13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 Lrrc59Q922Q8 307 aaKnown RBP13.04□□□□□ -0.32
Limch1-201ENSMUST00000038188 TnnQ80Z71 1560 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Map3k13Q1HKZ5 959 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Nutm1Q8BHP2 1126 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Smim5Q8BT42 78 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 OptnQ8K3K8 584 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Rrbp1Q99PL5 1605 aaKnown RBP13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Glg1Q61543 1175 aaKnown RBP13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Cfap74Q3UY96 1578 aa13.03□□□□□ -0.32
Limch1-201ENSMUST00000038188 Plekhg5Q66T02 1073 aa13.02□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ncbp3Q8BZR9 615 aaKnown RBP13.02□□□□□ -0.33
Limch1-201ENSMUST00000038188 Zc3h12cQ5DTV4 884 aa13.02□□□□□ -0.33
Limch1-201ENSMUST00000038188 Kcna6Q61923 529 aa13.01□□□□□ -0.33
Limch1-201ENSMUST00000038188 Cyp2ab1S4R196 498 aa13.01□□□□□ -0.33
Limch1-201ENSMUST00000038188 Washc2Q6PGL7 1334 aa13.01□□□□□ -0.33
Limch1-201ENSMUST00000038188 Hfm1D3Z4R1 1434 aa13.01□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ccdc27Q3V036 639 aa13.01□□□□□ -0.33
Limch1-201ENSMUST00000038188 Gm7347D3YYI9 267 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Speer4aF8VPX6 267 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Amotl2Q8K371 772 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Yeats2Q3TUF7 1407 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Cfap69Q8BH53 942 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Efcab2Q9CQ46 164 aa13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Zcrb1Q9CZ96 217 aaKnown RBP13□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ncbp1Q3UYV9 790 aaKnown RBP12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Slx4Q6P1D7 1565 aa12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Cavin4A2AMM0 362 aa12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ehmt1Q5DW34 1296 aa12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Arid3aQ62431 601 aa12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ptcd1Q8C2E4 695 aaKnown RBP12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Tmod2Q9JKK7 351 aa12.99□□□□□ -0.33
Limch1-201ENSMUST00000038188 Agtpbp1Q641K1 1218 aa12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 Ppp2r1aQ76MZ3 589 aa12.98□□□□□ -0.33
Limch1-201ENSMUST00000038188 GorabQ8BRM2 368 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms