RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 MyzapQ3UIJ9 466 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cfap69Q8BH53 942 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Slu7Q8BHJ9 585 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Taf7lQ9D3R9 471 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cnnm1Q0GA42 951 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Shq1Q7TMX5 569 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Serpina10Q8R121 448 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 St5Q924W7 1134 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cul5Q9D5V5 780 aa8.18□□□□□ -1.1
Ncl-201ENSMUST00000027438 Fermt1P59113 677 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Gm44503E9PYU5 387 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 CalrP14211 416 aaKnown RBP8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Usp48Q3V0C5 1052 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cog6Q8R3I3 657 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Ankrd49Q8VE42 238 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Atp6v1e1P50518 226 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Ddx27Q921N6 760 aaKnown RBP8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Mpp4Q6P7F1 635 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Smg6P61406 1418 aaKnown RBP8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Erlin2Q8BFZ9 340 aa8.17□□□□□ -1.1
Ncl-201ENSMUST00000027438 Zfp853A0A1D5RM95 733 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cspg5Q71M36 566 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Sh3d21Q7TSG5 549 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Fchsd2Q3USJ8 740 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Cacna2d4Q5RJF7 1116 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Kiaa0754Q69ZZ9 979 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Bms1Q6PGF5 1284 aaKnown RBP8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Rsf1E9PWW9 1441 aaKnown RBP8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Zranb1Q7M760 708 aa8.16□□□□□ -1.1
Ncl-201ENSMUST00000027438 Rbm25B2RY56 838 aaKnown RBP8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Dctn1O08788 1281 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Kif11Q6P9P6 1052 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Srcin1Q9QWI6 1250 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Elp1Q7TT37 1333 aaKnown RBP8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Svs3aF2Z472 265 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Pard3bQ9CSB4 1203 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 CenpsQ9D084 142 aa8.15□□□□□ -1.1
Ncl-201ENSMUST00000027438 Dcaf11Q91VU6 549 aa8.15□□□□□ -1.11
Ncl-201ENSMUST00000027438 Nap1l3Q794H2 544 aa8.15□□□□□ -1.11
Ncl-201ENSMUST00000027438 Washc2Q6PGL7 1334 aa8.15□□□□□ -1.11
Ncl-201ENSMUST00000027438 CenpqQ9CPQ5 267 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Mipol1Q9D9F8 279 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 GorabQ8BRM2 368 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Usp33Q8R5K2 909 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Kif27Q7M6Z4 1394 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Pde4aO89084 844 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ccdc34Q3UI66 367 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Rai14Q9EP71 979 aaKnown RBP8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ascc2Q91WR3 749 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ccnb3Q810T2 1396 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Dact3Q0PHV7 610 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Speer4f1Q9D5Q6 258 aa8.14□□□□□ -1.11
Ncl-201ENSMUST00000027438 Tmf1B9EKI3 1091 aa8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 MsnP26041 577 aaKnown RBP8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 Dpp7Q9ET22 506 aa8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 Fmnl2A2APV2 1086 aa8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 DcpsQ9DAR7 338 aa8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 Wdr43Q6ZQL4 677 aaKnown RBP8.13□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ccdc173A0JLY1 547 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Syndig1A2ANU3 258 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 MycP01108 439 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 SfswapQ3USH5 945 aaKnown RBP8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Rnf20Q5DTM8 973 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ppp1r9bQ6R891 817 aaKnown RBP8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Sf3a1Q8K4Z5 791 aaKnown RBP8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ercc3P49135 783 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 B4galnt3Q6L8S8 986 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Cluap1Q8R3P7 413 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Nlrp3Q8R4B8 1033 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 CastP51125 788 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Maats1Q8BRC6 783 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Odf2lQ9D478 642 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Tnnt2P50752 301 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ccdc185Q3V118 621 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Cetn2Q9R1K9 172 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Duxf3A0A0N4SV92 674 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Setd5Q5XJV7 1441 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Znf622Q91VY9 476 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Pcdhb2Q91Y00 799 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Scaf1Q5U4C3 1256 aaKnown RBP8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 KarsQ99MN1 595 aaKnown RBP8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Mx2Q9WVP9 655 aa8.12□□□□□ -1.11
Ncl-201ENSMUST00000027438 Myd88P22366 296 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ncf1Q09014 390 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Znf532Q6NXK2 1036 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Slc13a4Q8BZ82 625 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Zscan20B2KFW1 1030 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Hook3Q8BUK6 718 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Tbc1d8Q9Z1A9 1134 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Il4rP16382 810 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Ttc19Q8CC21 365 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 AatfQ9JKX4 526 aaKnown RBP8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Stxbp4Q9WV89 557 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 IydQ9DCX8 285 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Sh3bgrQ9WUZ7 214 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Mtmr7Q9Z2C9 660 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Art2aP17981 287 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Nap1l5Q9JJF0 156 aa8.11□□□□□ -1.11
Ncl-201ENSMUST00000027438 Nf2P46662 596 aa8.1□□□□□ -1.11
Ncl-201ENSMUST00000027438 Mink1Q9JM52 1308 aa8.1□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms