RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Krt85Q9Z2T6 507 aa14.48□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Nup155Q99P88 1391 aaKnown RBP14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Abcd1P48410 736 aa14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Jakmip3Q5DTN8 844 aa14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Tfip11Q9ERA6 838 aaKnown RBP14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Larp1Q6ZQ58 1072 aaKnown RBP14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Maats1Q8BRC6 783 aa14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Rbm25B2RY56 838 aaKnown RBP14.47□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Gm18336A0A140LIU8 765 aa14.46□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Pafah1b1P63005 410 aaKnown RBP14.46□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 Commd10Q8JZY2 202 aa14.46□□□□□ -0.09
Pcdhac1-201ENSMUST00000007584 CenpjQ569L8 1344 aa14.46□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Jakmip1Q8BVL9 626 aa14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Tex2Q6ZPJ0 1128 aaKnown RBP14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 IncenpQ9WU62 880 aa14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 ImpactO55091 318 aa14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Fam114a1Q9D281 569 aa14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Atp2b2Q9R0K7 1198 aa14.45□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Tax1bp1Q3UKC1 814 aaKnown RBP14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Cpa2Q504N0 417 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ccdc94Q9D6J3 314 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Zeb2Q9R0G7 1215 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Dapk1Q80YE7 1442 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Nf2P46662 596 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Mnat1P51949 309 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Smc2Q8CG48 1191 aaKnown RBP14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Als2cr12Q8BVM7 383 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Smc4Q8CG47 1286 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Themis2Q91YX0 663 aa14.44□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Map2k1P31938 393 aa14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ankrd24Q80VM7 985 aa14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Mcm3P25206 812 aaKnown RBP14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Nbr1P97432 988 aa14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Tspyl3Q3UYP3 334 aa14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Prpf4bQ61136 1007 aaKnown RBP14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 CrcpO35427 148 aa14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Scaf1Q5U4C3 1256 aaKnown RBP14.43□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Kiaa1211Q5PR69 1207 aa14.42□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Tex19.1Q99MV2 351 aa14.42□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Bbof1Q3V079 533 aa14.42□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Gnai1B2RSH2 354 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Adcy5P84309 1262 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Gnai3Q9DC51 354 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ercc3P49135 783 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Tango6Q8C3S2 1079 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Rbm28Q8CGC6 750 aaKnown RBP14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Vps37cQ8R105 352 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ccdc96Q9CR92 584 aa14.41□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ccdc73Q8CDM4 1066 aa14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Gtpbp4Q99ME9 634 aaKnown RBP14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Luc7lQ9CYI4 371 aaKnown RBP14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Dnajc2P54103 621 aaKnown RBP14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Map3k7clP58500 142 aa14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Hspa4Q61316 841 aa14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ccdc93Q7TQK5 629 aa14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Ccdc39Q9D5Y1 937 aa14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Cfdp1O88271 295 aaKnown RBP14.4□□□□□ -0.1
Pcdhac1-201ENSMUST00000007584 Acbd3Q8BMP6 525 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Gm10471E9Q1C7 252 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ccdc191J3QQ27 883 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 IqcgQ80W32 419 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Trerf1Q8BXJ2 1205 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Pip4k2aO70172 405 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ppp1r9bQ6R891 817 aaKnown RBP14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 4931400O07RikQ9D4M5 137 aa14.39□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Skor1Q8BX46 964 aa14.38□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Cep89Q9CZX2 791 aa14.38□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Gcc1Q9D4H2 778 aa14.38□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 RalylQ8BTF8 293 aa14.38□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Cep135Q6P5D4 1140 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Vps18Q8R307 973 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ciz1Q8VEH2 845 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Swt1Q9DBQ9 907 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 LarsQ8BMJ2 1178 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Wdr33Q8K4P0 1330 aaKnown RBP14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Dhx16G3X8X0 1044 aaKnown RBP14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Rbm27Q5SFM8 1060 aaKnown RBP14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ctr9Q62018 1173 aaKnown RBP14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Usp40Q8BWR4 1235 aa14.37□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Fam107bQ3TGF2 131 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ppip5k2Q6ZQB6 1129 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Jade2Q6ZQF7 829 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Nucb2P81117 420 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Mipol1Q9D9F8 279 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Mcm6P97311 821 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Smarcc1P97496 1104 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Sv2bQ8BG39 683 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Rassf4Q8CB96 322 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 DonsonQ9QXP4 560 aa14.36□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Cep57l1Q8VDS7 400 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Mmel1Q9JLI3 765 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Kif2aP28740 705 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 L3mbtl2P59178 703 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Cabp4Q8VHC5 271 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Snw1Q9CSN1 536 aaKnown RBP14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Zbtb22Q9Z0G7 638 aa14.35□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ranbp1P34022 203 aaKnown RBP14.34□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 4921504E06RikQ8CET2 560 aa14.34□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Spata24Q6P926 205 aa14.34□□□□□ -0.11
Pcdhac1-201ENSMUST00000007584 Ppp6r1Q7TSI3 856 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms