RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CRTC1Q6UUV9 634 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZNF788Q6ZQV5 615 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SFTPA1Q8IWL2 248 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 FAM186BQ8IYM0 893 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 CNTROBQ8N137 903 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 TERB1Q8NA31 727 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZNF764Q96H86 408 aaPredicted RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 WDYHV1Q96HA8 205 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SNX27Q96L92 541 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SGCZQ96LD1 299 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 ELAC2Q9BQ52 826 aaKnown RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 EIF2AQ9BY44 585 aaKnown RBP4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZNF700Q9H0M5 742 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 SLC25A32Q9H2D1 315 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 STEAP1Q9UHE8 339 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 PTPRCP08575 1304 aa4.2□□□□□ -1.74
CKS1BP3-201ENST00000600888 CNTNAP1P78357 1384 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 GRM8O00222 908 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 PSMD14O00487 310 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 ECE2O60344 883 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 UFL1O94874 794 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 NDST3O95803 873 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 IFIT2P09913 472 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 GABRB3P28472 473 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 RBL1P28749 1068 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CD38P28907 300 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 IGHMBP2P38935 993 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 GMPSP49915 693 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CCT4P50991 539 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CLCA4Q14CN2 919 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 SLC35G1Q2M3R5 365 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 SYCP2LQ5T4T6 812 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 FAXCQ5TGI0 409 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 DPY19L2P1Q6NXN4 242 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 TRIM72Q6ZMU5 477 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 C15orf52Q6ZUT6 534 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 GLIS1Q8NBF1 620 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 AGBL3Q8NEM8 1001 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 MBD3L2Q8NHZ7 208 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CYP2W1Q8TAV3 490 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 DEPTORQ8TB45 409 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 HASPINQ8TF76 798 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 GJA10Q969M2 543 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZNF566Q969W8 418 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 DAZAP1Q96EP5 407 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 SNX18Q96RF0 628 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CIPCQ9C0C6 399 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 ANKRD2Q9GZV1 360 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 DBNDD1Q9H9R9 158 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CERS4Q9HA82 394 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 NLRC4Q9NPP4 1024 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 TMOD4Q9NZQ9 345 aa4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CNOT7Q9UIV1 285 aaKnown RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZMYND8Q9ULU4 1186 aaPredicted RBP4.19□□□□□ -1.74
CKS1BP3-201ENST00000600888 CCDC194A0A1B0GVG4 234 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ANKRD18BA2A2Z9 1011 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 A8MVJ9 347 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 H7C1Q1 480 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 OVOL3O00110 214 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 TMPRSS11DO60235 418 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 CCNT2O60583 730 aaKnown RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 RBMXL2O75526 392 aaKnown RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 NHLRC4P0CG21 123 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ARP10275 920 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 IDEP14735 1019 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 EEF1GP26641 437 aaKnown RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 MCM5P33992 734 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 HTR7P34969 479 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 DIO1P49895 249 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 DEUP1Q05D60 604 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 LMAN2Q12907 356 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 HDAC1Q13547 482 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ST3GAL2Q16842 350 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 MPEG1Q2M385 716 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 RABL6Q3YEC7 729 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 TMEM119Q4V9L6 283 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 RAP1GAP2Q684P5 730 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ABLIM2Q6H8Q1 611 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 MRNIPQ6NTE8 343 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 SYCE2Q6PIF2 218 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 KIRREL2Q6UWL6 708 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 BCDIN3DQ7Z5W3 292 aaKnown RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ZNF575Q86XF7 245 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 KRT73Q86Y46 540 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 CCDC28AQ8IWP9 274 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 FSTL5Q8N475 847 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 SEMA6DQ8NFY4 1073 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 SUN3Q8TAQ9 357 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 KIAA1191Q96A73 305 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 KAZALD1Q96I82 304 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 MPHOSPH8Q99549 860 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 COA1Q9GZY4 146 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 PCDHAC1Q9H158 963 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 SNX15Q9NRS6 342 aa4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 C9orf78Q9NZ63 289 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP3-201ENST00000600888 RGL1Q9NZL6 768 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms