RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 KRT86O43790 486 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRCH4O75427 683 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TCEA3O75764 348 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 STAM2O75886 525 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 KRT34O76011 436 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ABLIM3O94929 683 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 UBOX5O94941 541 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRAMEF12O95522 483 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 VTNP04004 478 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 APPP05067 770 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 APODP05090 189 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PARP1P09874 1014 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 JMJD7P0C870 316 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF853P0CG23 659 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRKAR1AP10644 381 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CKMT1AP12532 417 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ITGA4P13612 1032 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRIM27P14373 513 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 HOXB2P14652 356 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ATF2P15336 505 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 EPHA8P29322 1005 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CCND2P30279 289 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 UGT1A5P35504 534 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC16A2P36021 539 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SPAM1P38567 509 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TNFSF9P41273 254 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 RXRGP48443 463 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRAPPC10P48553 1259 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 DGKQP52824 942 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 NLRP11P59045 1033 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 RPL10AP62906 217 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 GNAI1P63096 354 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRR5P85299 388 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MC1RQ01726 317 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDK18Q07002 472 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 DSC1Q08554 894 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 BFSP1Q12934 665 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 FGL2Q14314 439 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCOLCEQ15113 449 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TCEAL1Q15170 157 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIF26BQ2KJY2 2108 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CCDC96Q2M329 555 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC35G1Q2M3R5 365 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC10A6Q3KNW5 377 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SBK1Q52WX2 424 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 KCNT1Q5JUK3 1230 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CCDC158Q5M9N0 1113 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 STXBP5Q5T5C0 1151 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SFMBT2Q5VUG0 894 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 EEF1DP3Q658K8 133 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 NUGGCQ68CJ6 796 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 KIAA1324Q6UXG2 1013 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 BTNL9Q6UXG8 535 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 RAB11FIP2Q7L804 512 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CAMKMTQ7Z624 323 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MRGPRGQ86SM5 289 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 FJX1Q86VR8 437 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF761Q86XN6 746 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 DCP2Q8IU60 420 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ADGRG2Q8IZP9 1017 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF808Q8N4W9 903 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 LZTR1Q8N653 840 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 METTL13Q8N6R0 699 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ADAMTS17Q8TE56 1095 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ITLN2Q8WWU7 325 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZBTB8AQ96BR9 441 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 C19orf60Q96EN9 201 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF668Q96K58 619 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 RHOVQ96L33 236 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ACAP3Q96P50 834 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 JMJD8Q96S16 334 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 HAPLN3Q96S86 360 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 DUSP9Q99956 384 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 SRRTQ9BXP5 876 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 STRADBQ9C0K7 418 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 VPS11Q9H270 941 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TASP1Q9H6P5 420 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF287Q9HBT7 754 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PREBQ9HCU5 417 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PIH1D3Q9NQM4 214 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ITM2CQ9NQX7 267 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 GDF3Q9NR23 364 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 AP5S1Q9NUS5 200 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 DUS2Q9NX74 493 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 GFOD1Q9NXC2 390 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CEP72Q9P209 647 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTRRQ9UBK8 725 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRPS1Q9UHF7 1281 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MAFFQ9ULX9 164 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 OSGIN2Q9Y236 505 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ASB3Q9Y575 518 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCDHB2Q9Y5E7 798 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCDHB14Q9Y5E9 798 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 INSL5Q9Y5Q6 135 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 BACE2Q9Y5Z0 518 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDY1Q9Y6F8 540 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 NOTCH3Q9UM47 2321 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMEM131Q92545 1883 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MYO18AQ92614 2054 aaKnown RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 INTS1Q8N201 2190 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms