RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 GOLGA8SH3BPF8 625 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 MOCS3O95396 460 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 SRPRAP08240 638 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 HLA-EP13747 358 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 HOXD12P35452 270 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 PTGER3P43115 390 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 DHPSP49366 369 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 VASPP50552 380 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CCDC6Q16204 474 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 ARTNQ5T4W7 220 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 MON1BQ7L1V2 547 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 ERMP1Q7Z2K6 904 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CYP2U1Q7Z449 544 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 TMEFF1Q8IYR6 380 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 SIPA1Q96FS4 1042 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CFAP57Q96MR6 1250 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 RPRD1AQ96P16 312 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 TTYH3Q9C0H2 523 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CBX8Q9HC52 389 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CD93Q9NPY3 652 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 PRSS16Q9NQE7 514 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 METTL5Q9NRN9 209 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 WSB2Q9NYS7 404 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 SUN2Q9UH99 717 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 VANGL2Q9ULK5 521 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 CYP8B1Q9UNU6 501 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 TBC1D30Q9Y2I9 924 aa17.74■□□□□ 0.43
SFSWAP-205ENST00000537164 IGLV3-10A0A075B6K4 115 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 C2CD4BA6NLJ0 364 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 DRGXA6NNA5 263 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 GDF9O60383 454 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 CLDN11O75508 207 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 CALB1P05937 261 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 RDXP35241 583 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 PTPN9P43378 593 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 TPMTP51580 245 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 RPL6Q02878 288 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ZBTB16Q05516 673 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 HNRNPA1L2Q32P51 320 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 FIGNQ5HY92 759 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 KIAA1324Q6UXG2 1013 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 C14orf80Q86SX3 495 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 SYT12Q8IV01 421 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 APCDD1Q8J025 514 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 C3orf20Q8ND61 904 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 CENPIQ92674 756 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 PRCCQ92733 491 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ERLEC1Q96DZ1 483 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ALG14Q96F25 216 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ZNF419Q96HQ0 510 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 HAPLN3Q96S86 360 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 PPP1R9BQ96SB3 815 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 C11orf70Q9BRQ4 267 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 RTKNQ9BST9 563 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 EDEM3Q9BZQ6 932 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 AIPL1Q9NZN9 384 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ADAM22Q9P0K1 906 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 EVLQ9UI08 416 aaPredicted RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 PILRBQ9UKJ0 227 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 CDV3Q9UKY7 258 aaKnown RBP17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 ERVW-1Q9UQF0 538 aa17.73■□□□□ 0.43
SFSWAP-205ENST00000537164 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 SLC30A4O14863 429 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 CD6P30203 668 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 OXTRP30559 389 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 IRAK1P51617 712 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 ATXN1P54253 815 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 CDH4P55283 916 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 ST8SIA6P61647 398 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 ECT2LQ008S8 904 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 SULT2A1Q06520 285 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 LYSMD4Q5XG99 296 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 STRADAQ7RTN6 431 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 LUZP1Q86V48 1076 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 CIR1Q86X95 450 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 SLC41A1Q8IVJ1 513 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 EMC1Q8N766 993 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 C12orf50Q8NA57 414 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 SIK2Q9H0K1 926 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 SMOC1Q9H4F8 434 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 RXFP3Q9NSD7 469 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 OR51B4Q9Y5P0 310 aa17.72■□□□□ 0.43
SFSWAP-205ENST00000537164 CACNA1EQ15878 2313 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 FAM170AA1A519 330 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 TARSL2A2RTX5 802 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 LRRC53A6NM62 1247 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 KRT3P12035 628 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 PDGFRAP16234 1089 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 MZF1P28698 734 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 PBX1P40424 430 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 PRKCIP41743 596 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 CTSOP43234 321 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 ZNF33AQ06730 810 aa17.71■□□□□ 0.43
SFSWAP-205ENST00000537164 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms