RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 HMG20AQ9NP66 347 aa8.69□□□□□ -1.02
PCM1-212ENST00000519253 C8orf4Q9NR00 106 aa8.69□□□□□ -1.02
PCM1-212ENST00000519253 SNX15Q9NRS6 342 aa8.69□□□□□ -1.02
PCM1-212ENST00000519253 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
PCM1-212ENST00000519253 MYH15Q9Y2K3 1946 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SPDYE2BA6NHP3 402 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 HBP1O60381 514 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CSPG5O95196 566 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SPDYE6P0CI01 402 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ERVK-10P10266 1014 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 USP4Q13107 963 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CBX3Q13185 183 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 GRM1Q13255 1194 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 NADK2Q4G0N4 442 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 GADL1Q6ZQY3 521 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CCDC80Q76M96 950 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 METTL23Q86XA0 190 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 FAM131BQ86XD5 332 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SNRNP25Q9BV90 132 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 TMEM39BQ9GZU3 492 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 RIC8BQ9NVN3 520 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 DPP3Q9NY33 737 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SCN3BQ9NY72 215 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 DAPK2Q9UIK4 370 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 TRHDEQ9UKU6 1024 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 NUP188Q5SRE5 1749 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SNAP91O60641 907 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 IDH3AP50213 366 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 KRR1Q13601 381 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 SQLEQ14534 574 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CRY2Q49AN0 593 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 HABP4Q5JVS0 413 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 LIPMQ5VYY2 423 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ABRAXAS1Q6UWZ7 409 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ERI1Q8IV48 349 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 ATPAF2Q8N5M1 289 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 PLD5Q8N7P1 536 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CHST13Q8NET6 341 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 RNF139Q8WU17 664 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 USP6NLQ92738 828 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.68□□□□□ -1.02
PCM1-212ENST00000519253 SIRPGQ9P1W8 387 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 E7ESA3 106 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ACKR2O00590 384 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 GM2AP17900 193 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 EPHA3P29320 983 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 HMGCS2P54868 508 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CHRNB3Q05901 458 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 C15orf59Q2T9L4 293 aaPredicted RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 AMIGO2Q86SJ2 522 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 DIS3LQ8TF46 1054 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 TUBGCP3Q96CW5 907 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 FAM84AQ96KN4 292 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 POLR1BQ9H9Y6 1135 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CRTAMO95727 393 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ZNF12P17014 697 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 S100A5P33763 92 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 NDST1P52848 882 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ILF2Q12905 390 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 TRAF2Q12933 501 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 TTLL4Q14679 1199 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 NEDD8Q15843 81 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 DACT2Q5SW24 774 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 ACOT1Q86TX2 421 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 SFRP1Q8N474 314 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 UBR7Q8N806 425 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 APPL2Q8NEU8 664 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 VAT1Q99536 393 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CHST12Q9NRB3 414 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 WRAP73Q9P2S5 460 aaPredicted RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 STAG3L1P0CL83 205 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 GRIA4P48058 902 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 GEMP55040 296 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CDH8P55286 799 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 HPCAP84074 193 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 CCDC60Q8IWA6 550 aaPredicted RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 ZCCHC7Q8N3Z6 543 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 FAM47BQ8NA70 645 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 IPMKQ8NFU5 416 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 COX4I2Q96KJ9 171 aa8.68□□□□□ -1.02
PCM1-212ENST00000519253 PARP4Q9UKK3 1724 aaKnown RBP8.68□□□□□ -1.02
PCM1-212ENST00000519253 APBA3O96018 575 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 CD4P01730 458 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 CXCL8P10145 99 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 TCF7P36402 384 aaPredicted RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 AVPR1AP37288 418 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 MRPS15P82914 257 aaKnown RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 KLHDC10Q6PID8 442 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 RBM12BQ8IXT5 1001 aaKnown RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 EPS8L2Q9H6S3 715 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 PCDH18Q9HCL0 1135 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 DDX28Q9NUL7 540 aaKnown RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 CCDC167Q9P0B6 97 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 DFFAO00273 331 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 NR5A2O00482 541 aa8.67□□□□□ -1.02
PCM1-212ENST00000519253 SNRPB2P08579 225 aaKnown RBP8.67□□□□□ -1.02
PCM1-212ENST00000519253 CD151P48509 253 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms