RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ABCB8Q9NUT2 735 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 SPATA6Q9NWH7 488 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 DDX56Q9NY93 547 aaKnown RBP6.57□□□□□ -1.36
SF3B1-206ENST00000462613 SLC25A13Q9UJS0 675 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 GGA2Q9UJY4 613 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 VPS28Q9UK41 221 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 FZD10Q9ULW2 581 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 CACNA1IQ9P0X4 2223 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 ZDBF2Q9HCK1 2354 aa6.57□□□□□ -1.36
SF3B1-206ENST00000462613 RALGAPA1Q6GYQ0 2036 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 IGLV3-10A0A075B6K4 115 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ILVBLA1L0T0 632 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 MACROD2A1Z1Q3 448 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ZSCAN5CA6NGD5 496 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 PJA2O43164 708 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ZSCAN12O43309 604 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 LAMTOR5O43504 91 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 BUB1O43683 1085 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SYNCRIPO60506 623 aaKnown RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 RAMP2O60895 175 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 RNF40O75150 1001 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ALDH1A2O94788 518 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 EGFP01133 1207 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 DCNP07585 359 aaKnown RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CHRNB1P11230 501 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 TNNT1P13805 278 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 AVPR2P30518 371 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 TIE1P35590 1138 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 GGCXP38435 758 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SLC6A11P48066 632 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CDH6P55285 790 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SEC13P55735 322 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 YBEYP58557 167 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CCINQ13939 588 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 DPYSL2Q16555 572 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SMTNL2Q2TAL5 461 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 C5orf22Q49AR2 442 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 C2orf27AQ580R0 203 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 LRRC38Q5VT99 294 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CWF19L1Q69YN2 538 aaKnown RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 IL31Q6EBC2 164 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 FSTL4Q6MZW2 842 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 RETSATQ6NUM9 610 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 C11orf63Q6NUN7 778 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SERPINA13PQ6UXR4 307 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 TFAP2DQ7Z6R9 452 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 METTL3Q86U44 580 aaKnown RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 C12orf40Q86WS4 652 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC105Q8IYK2 499 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CHPFQ8IZ52 775 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 SPEM1Q8N4L4 309 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 UBL4BQ8N7F7 174 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 IGSF8Q969P0 613 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CLDN23Q96B33 292 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 BTBD6Q96KE9 485 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC114Q96M63 670 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF830Q96NB3 372 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 DESI2Q9BSY9 194 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CALN1Q9BXU9 219 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 ADAM33Q9BZ11 813 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 TRIM7Q9C029 511 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 IRF2BPLQ9H1B7 796 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 MAGEH1Q9H213 219 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CHRDQ9H2X0 955 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 POLMQ9NP87 494 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 HAUS2Q9NVX0 235 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 CALCOCO1Q9P1Z2 691 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 RCOR3Q9P2K3 495 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 FBXO10Q9UK96 956 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 AMFRQ9UKV5 643 aa6.56□□□□□ -1.36
SF3B1-206ENST00000462613 FARP1Q9Y4F1 1045 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-206ENST00000462613 PLXND1Q9Y4D7 1925 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 A0A0A0MRY4 1105 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC66A2RUB6 948 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 LRRD1A4D1F6 860 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GOLGA6L9A6NEM1 432 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ARHGAP42A6NI28 874 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 DRGXA6NNA5 263 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 MIF4GDA9UHW6 222 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 GFRA2O00451 464 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 NEBLO76041 1014 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 PDGFBP01127 241 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 KRT1P04264 644 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SRPRAP08240 638 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 DLDP09622 509 aaKnown RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RARAP10276 462 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 HOXB2P14652 356 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 ZFXP17010 805 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 COMTP21964 271 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 HLA-FP30511 346 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 NTSR1P30989 418 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-206ENST00000462613 CXCL12P48061 93 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 HCAR3P49019 387 aa6.55□□□□□ -1.36
SF3B1-206ENST00000462613 SGSHP51688 502 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms