RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 MRPL43Q8N983 215 aaKnown RBP5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD49Q8WVL7 239 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 UBE2FQ969M7 185 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 KLHL29Q96CT2 875 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 RNFT2Q96EX2 444 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 LINC00615Q96LM1 132 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 C1orf74Q96LT6 269 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 PAFAH2Q99487 392 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CLSTN3Q9BQT9 956 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 MESP1Q9BRJ9 268 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 TCHPQ9BT92 498 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CACNG6Q9BXT2 260 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 SLC46A2Q9BY10 475 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 PACSIN1Q9BY11 444 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 ACPTQ9BZG2 426 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 ISCUQ9H1K1 167 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CCDC134Q9H6E4 229 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 GPR35Q9HC97 309 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CD93Q9NPY3 652 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 MBNL1Q9NR56 388 aaKnown RBP5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 ABCB8Q9NUT2 735 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 SPATA6Q9NWH7 488 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 GPRC5DQ9NZD1 345 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 NCDNQ9UBB6 729 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 EXTL2Q9UBQ6 330 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 EBF1Q9UH73 591 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 NENFQ9UMX5 172 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 RPH3AQ9Y2J0 694 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 CLDN16Q9Y5I7 305 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 SESN1Q9Y6P5 492 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 COL15A1P39059 1388 aa5.55□□□□□ -1.52
HMGB3P10-201ENST00000434734 TCRBV7S2A1N4TA0A589 114 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 KCNJ18B7U540 433 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 VWA5AO00534 786 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 IKBKBO14920 756 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SEPT4O43236 478 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TSC22D2O75157 780 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SLC43A1O75387 559 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ITGA10O75578 1167 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SASH1O94885 1247 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 RASAL1O95294 804 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TRIM16O95361 564 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 LARGE1O95461 756 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ONECUT2O95948 504 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 GHRP10912 638 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 CDH2P19022 906 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 RPA1P27694 616 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 PTPN7P35236 360 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 PNPLA4P41247 253 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TXKP42681 527 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 GPD2P43304 727 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ATP5OP48047 213 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 PMS2P54278 862 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 MFAP4P55083 255 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 EIF3BP55884 814 aaKnown RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 CORO7P57737 925 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TRA2BP62995 288 aaKnown RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 IL13RA1P78552 427 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 PPATQ06203 517 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 EGR3Q06889 387 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SLFN5Q08AF3 891 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 KCNJ12Q14500 433 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 LETM2Q2VYF4 491 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD20A4Q4UJ75 823 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD20A8PQ5CZ79 823 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD20A2Q5SQ80 823 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD20A1Q5TYW2 823 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 C12orf60Q5U649 245 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ANKRD20A3Q5VUR7 823 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 MAMDC4Q6UXC1 1216 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SERPINA13PQ6UXR4 307 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 GBP6Q6ZN66 633 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 RBPMS2Q6ZRY4 209 aaKnown RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TAS1R1Q7RTX1 841 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 DCP2Q8IU60 420 aaKnown RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 VPS52Q8N1B4 723 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 FBXW8Q8N3Y1 598 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 FBXL6Q8N531 539 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 MB21D1Q8N884 522 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 XXYLT1Q8NBI6 393 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 SHCBP1Q8NEM2 672 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 NEK11Q8NG66 645 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 FAM216AQ8WUB2 273 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 BORCS6Q96GS4 357 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 INTS4Q96HW7 963 aaKnown RBP5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 CLMNQ96JQ2 1002 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 KLHL15Q96M94 604 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 HSPA12BQ96MM6 686 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 PWWP2AQ96N64 755 aa5.54□□□□□ -1.52
HMGB3P10-201ENST00000434734 TBC1D32Q96NH3 1257 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms