RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 BIN1O00499 593 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CAPN9O14815 690 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 RNGTTO60942 597 aaKnown RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 LETM1O95202 739 aaPredicted RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 DNTTP04053 509 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 EPHX1P07099 455 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CD70P32970 193 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CLCN1P35523 988 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CSKP41240 450 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 MATKP42679 507 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 WASP42768 502 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CDH4P55283 916 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 SIM1P81133 766 aaPredicted RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 SLC20A2Q08357 652 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 UAP1L1Q3KQV9 507 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 PLEKHG6Q3KR16 790 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 C9orf64Q5T6V5 341 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 DCAF12L1Q5VU92 463 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CDKAL1Q5VV42 579 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 SETD3Q86TU7 594 aaPredicted RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 IQCHQ86VS3 1027 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 ZNF683Q8IZ20 524 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 SKA1Q96BD8 255 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 HAPLN3Q96S86 360 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 TUBGCP2Q9BSJ2 902 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 PLK2Q9NYY3 685 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 PPARGC1AQ9UBK2 798 aaKnown RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 TJP2Q9UDY2 1190 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 INTS6Q9UL03 887 aaKnown RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 STAP1Q9ULZ2 295 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 DMTF1Q9Y222 760 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 PCDHB9Q9Y5E1 797 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 OR51B4Q9Y5P0 310 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 RAD54BQ9Y620 910 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 LRRC10BA6NIK2 292 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 VILLO15195 856 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 BCAT2O15382 392 aaPredicted RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 MSI1O43347 362 aaKnown RBP8.7□□□□□ -1.02
MSL3-201ENST00000312196 CFIP05156 583 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 ABCB4P21439 1286 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 ECT2LQ008S8 904 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CCDC15Q0P6D6 951 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 SYPL2Q5VXT5 272 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 OR2T34Q8NGX1 318 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 ORAI3Q9BRQ5 295 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CIPCQ9C0C6 399 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 BTBD1Q9H0C5 482 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 PCOLCE2Q9UKZ9 415 aa8.7□□□□□ -1.02
MSL3-201ENST00000312196 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 GOLGA6L7A0A1B0GV03 622 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 LRRC72A6NJI9 287 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 SEMA4FO95754 770 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 KRT9P35527 623 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 NNMTP40261 264 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 SGSHP51688 502 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 OVGP1Q12889 678 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 TPD52L1Q16890 204 aaPredicted RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 TCP11X2Q5H9J9 407 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FAM46CQ5VWP2 391 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 LGI2Q8N0V4 545 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 DEFB106AQ8N104 65 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 IGSF8Q969P0 613 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 CPXM1Q96SM3 734 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 CEP44Q9C0F1 390 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.69□□□□□ -1.02
MSL3-201ENST00000312196 KLK13Q9UKR3 277 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 MYO6Q9UM54 1294 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 GPSM3Q9Y4H4 160 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FOXN3O00409 490 aaPredicted RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 MAGEC1O60732 1142 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 CYP1A1P04798 512 aaPredicted RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 TPM2P07951 284 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FTH1P19P0C7X4 201 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 AFF3P51826 1226 aaKnown RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 RACK1P63244 317 aaKnown RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 GRIK2Q13002 908 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 CDH18Q13634 790 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 KCNJ12Q14500 433 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 ELAVL3Q14576 367 aaKnown RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 SLC25A52Q3SY17 297 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 SLC45A4Q5BKX6 768 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 ZC3H12AQ5D1E8 599 aaKnown RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
MSL3-201ENST00000312196 FAM183BPQ6ZVS7 135 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 SND1Q7KZF4 910 aaKnown RBP eCLIP8.69□□□□□ -1.02
MSL3-201ENST00000312196 TRIM69Q86WT6 500 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 CHSY1Q86X52 802 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FRMD1Q8N878 549 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 TMIEQ8NEW7 156 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 FRS2Q8WU20 508 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 ASB12Q8WXK4 309 aa8.69□□□□□ -1.02
MSL3-201ENST00000312196 SPAG5Q96R06 1193 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms