RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SIN3BO75182 1162 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 TCEA3O75764 348 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 AGFG2O95081 481 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PABPC1P11940 636 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 MAT2AP31153 395 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 UBA7P41226 1012 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PSEN1P49768 467 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 TOB1P50616 345 aaPredicted RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 CYP4F2P78329 520 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 KCNA1Q09470 495 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 EFEMP1Q12805 493 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 ZNF177Q13360 481 aaPredicted RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 MCM6Q14566 821 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 CDKN3Q16667 212 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 GPD1LQ8N335 351 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 SMOQ99835 787 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 CBWD1Q9BRT8 395 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 MTG2Q9H4K7 406 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 NMUR1Q9HB89 426 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 KLHL11Q9NVR0 708 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 STRIP2Q9ULQ0 834 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PLAAQ9Y263 795 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PCDHB11Q9Y5F2 797 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PCDHGA7Q9Y5G6 932 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 PCDHA5Q9Y5H7 936 aa11.47□□□□□ -0.57
PTP4A1-207ENST00000639568 ITPR3Q14573 2671 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 SLC12A8A0AV02 714 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PRAMEF26H0Y7S4 382 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PLD2O14939 933 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 NOBOXO60393 691 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 BEST1O76090 585 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 GCNT3O95395 438 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 CST3P01034 146 aaPredicted RBP11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 TNNI1P19237 187 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 HOXD9P28356 352 aaPredicted RBP11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PSMD8P48556 350 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PPP2CBP62714 309 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PPP2CAP67775 309 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 KCNMA1Q12791 1236 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 KCNAB2Q13303 367 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 TRPC3Q13507 836 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 HNRNPA1L2Q32P51 320 aaKnown RBP11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 BORAQ6PGQ7 559 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 EFL1Q7Z2Z2 1120 aaKnown RBP11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 DSG4Q86SJ6 1040 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 FUKQ8N0W3 1084 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 ZMIZ2Q8NF64 920 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 FBXO18Q8NFZ0 1043 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 SLC2A14Q8TDB8 520 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 TMA16Q96EY4 203 aaKnown RBP11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 CSNK1G1Q9HCP0 422 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
PTP4A1-207ENST00000639568 NBASA2RRP1 2371 aa11.46□□□□□ -0.58
PTP4A1-207ENST00000639568 UBE4BO95155 1302 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 K7ESM1 405 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 KIAA0391O15091 583 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 SCAMP1O15126 338 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 SLC26A4O43511 780 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 PPP1R37O75864 691 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 PIAS2O75928 621 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 ADH1BP00325 375 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 FAM200BP0CF97 657 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 DLATP10515 647 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 LIPCP11150 499 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 CCDC130P13994 396 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 TRIM21P19474 475 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 POU3F2P20265 443 aaPredicted RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 C5AR1P21730 350 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 ZNF445P59923 1031 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 POM121L1PQ3SYA9 428 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 SETMARQ53H47 684 aaPredicted RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 ZCCHC8Q6NZY4 707 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 ACOT1Q86TX2 421 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 FBXO39Q8N4B4 442 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 AADATQ8N5Z0 425 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 WDR48Q8TAF3 677 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 RAD54LQ92698 747 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 CLIC5Q9NZA1 410 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 TBC1D7Q9P0N9 293 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 ARHGAP20Q9P2F6 1191 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 SEL1LQ9UBV2 794 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 CKAP5Q14008 2032 aa11.45□□□□□ -0.58
PTP4A1-207ENST00000639568 LY6G6EA0A0G2JKS1 128 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 RTN2O75298 545 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 IL1BP01584 269 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 GIMD1P0DJR0 217 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 SPIDRQ14159 915 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 GUSBP11Q6P575 273 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 CRTC1Q6UUV9 634 aa11.44□□□□□ -0.58
PTP4A1-207ENST00000639568 GPRIN1Q7Z2K8 1008 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms