RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 DUOXA1Q1HG43 343 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 WDR45BQ5MNZ6 344 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 BRMS1LQ5PSV4 323 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 RAP1GAP2Q684P5 730 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 SND1Q7KZF4 910 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD4-218ENST00000567377 FRMD1Q8N878 549 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 CADM4Q8NFZ8 388 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 EPS8L1Q8TE68 723 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 PGAP3Q96FM1 320 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-218ENST00000567377 LMLNQ96KR4 655 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 EDEM2Q9BV94 578 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 NUP58Q9BVL2 599 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 PCED1AQ9H1Q7 454 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.78■□□□□ 0.6
COMMD4-218ENST00000567377 SUSD2Q9UGT4 822 aa18.78■□□□□ 0.6
COMMD4-218ENST00000567377 LAMA1P25391 3075 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 DCDC2BA2VCK2 349 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 LGALS16A8MUM7 142 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 GRAP2O75791 330 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SRPRAP08240 638 aaKnown RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SOX5P35711 763 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 STAT1P42224 750 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 COPAP53621 1224 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 POLR2FP61218 127 aaKnown RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SULT2A1Q06520 285 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SFSWAPQ12872 951 aaKnown RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 ARID5BQ14865 1188 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 PTPRNQ16849 979 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 DAB2IPQ5VWQ8 1189 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SLC23A3Q6PIS1 610 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 TRIM72Q6ZMU5 477 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 NOP9Q86U38 636 aaKnown RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 NEK11Q8NG66 645 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 WFDC5Q8TCV5 224 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 CYB5D2Q8WUJ1 264 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 NT5C3BQ969T7 300 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 NPY6RQ99463 290 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 PRMT1Q99873 361 aaKnown RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SMOC1Q9H4F8 434 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 FAM207AQ9NSI2 230 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 WSB2Q9NYS7 404 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-218ENST00000567377 SIK3Q9Y2K2 1263 aa18.77■□□□□ 0.6
COMMD4-218ENST00000567377 CACNA1EQ15878 2313 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 A0A1B0GVM2 712 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 LNP1A1A4G5 178 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TCAF2A6NFQ2 919 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 M0QYT0 321 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TM4SF5O14894 197 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 ZNF18P17022 549 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 CSKP41240 450 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TPMTP51580 245 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 JAM2P57087 298 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 PITX1P78337 314 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-218ENST00000567377 CDR2Q01850 454 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TYRO3Q06418 890 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TRIM61Q5EBN2 209 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 XYLT1Q86Y38 959 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 ERGIC2Q96RQ1 377 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 BPIFA3Q9BQP9 254 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 WDCPQ9H6R7 721 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TMEM9BQ9NQ34 198 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 XPO7Q9UIA9 1087 aaKnown RBP18.76■□□□□ 0.59
COMMD4-218ENST00000567377 SCML1Q9UN30 329 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 SLC6A14Q9UN76 642 aa18.76■□□□□ 0.59
COMMD4-218ENST00000567377 TPRP12270 2363 aaKnown RBP18.76■□□□□ 0.59
COMMD4-218ENST00000567377 SYNJ2BP-COX16A0A087WUM0 186 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 SMTNL1A8MU46 457 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 RNASEH1O60930 286 aaKnown RBP18.75■□□□□ 0.59
COMMD4-218ENST00000567377 GFPT2O94808 682 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 SERPINF2P08697 491 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 CCDC172P0C7W6 258 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 GNSP15586 552 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 ITPKAP23677 461 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 NNMTP40261 264 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 CXCR3P49682 368 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 PLK1P53350 603 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 NOMO3P69849 1222 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 IRX4P78413 519 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 UBXN1Q04323 297 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 NME3Q13232 169 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 SYCP1Q15431 976 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 PLEKHG6Q3KR16 790 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 SLC25A52Q3SY17 297 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 PITRM1Q5JRX3 1037 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 FAM102AQ5T9C2 384 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-218ENST00000567377 TCEAL6Q6IPX3 200 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 CFAP52Q8N1V2 620 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 TCEAL3Q969E4 200 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 TOE1Q96GM8 510 aaKnown RBP18.75■□□□□ 0.59
COMMD4-218ENST00000567377 PCMTD1Q96MG8 357 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-218ENST00000567377 SLC6A17Q9H1V8 727 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 PRSS16Q9NQE7 514 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 RXFP3Q9NSD7 469 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 COX16Q9P0S2 106 aa18.75■□□□□ 0.59
COMMD4-218ENST00000567377 NOCTQ9UK39 431 aaKnown RBP18.75■□□□□ 0.59
COMMD4-218ENST00000567377 TARSL2A2RTX5 802 aaKnown RBP18.74■□□□□ 0.59
COMMD4-218ENST00000567377 CLDN11O75508 207 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms