RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MAPK15Q8TD08 544 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ADAMTS18Q8TE60 1221 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SEPT1Q8WYJ6 367 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZMYND19Q96E35 227 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSPAN17Q96FV3 270 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TOE1Q96GM8 510 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 C8orf49Q96NF6 230 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 POLR3CQ9BUI4 534 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ACE2Q9BYF1 805 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 INTS2Q9H0H0 1204 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ECT2Q9H8V3 914 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 FN3KRPQ9HA64 309 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 USP29Q9HBJ7 922 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRTM1Q9HBL6 345 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 UBN1Q9NPG3 1134 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 PXMP2Q9NR77 195 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTMR4Q9NYA4 1195 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 WSB2Q9NYS7 404 aaPredicted RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 APEX2Q9UBZ4 518 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 ADAM28Q9UKQ2 775 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 TCAF1Q9Y4C2 921 aa2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 SF3B1O75533 1304 aaKnown RBP eCLIP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 CHD3Q12873 2000 aaKnown RBP2.39□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 PMS2P1A4D2B8 440 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TBC1D3BA6NDS4 549 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 C9orf118A6NHY6 69 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 MYMKA6NI61 221 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 MEIS3P2A8K0S8 358 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 F6X3S4 739 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 IPO5O00410 1097 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 VILLO15195 856 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 GPR32O75388 356 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 IDH1O75874 414 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 RTN3O95197 1032 aaPredicted RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 FGF19O95750 216 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 PF4P02776 101 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CENPBP07199 599 aaPredicted RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 GSTM1P09488 218 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARSAP15289 507 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 DNASE1P24855 282 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CD82P27701 267 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SMARCA1P28370 1054 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 RFX5P48382 616 aaPredicted RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ELAVL2Q12926 359 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 AUHQ13825 339 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 NADK2Q4G0N4 442 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRR30Q53SZ7 412 aaPredicted RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SDE2Q6IQ49 451 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 RD3Q7Z3Z2 195 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMPRSS9Q7Z410 1059 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMC3Q7Z5M5 1100 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 DSG4Q86SJ6 1040 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZFAND4Q86XD8 727 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TCEAL8Q8IYN2 117 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF444Q8N0Y2 327 aaPredicted RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 GOLM1Q8NBJ4 401 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ACRBPQ8NEB7 543 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 WFDC11Q8NEX6 87 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SDR42E1Q8WUS8 393 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRAPPC12Q8WVT3 735 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ROBO4Q8WZ75 1007 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SNX19Q92543 992 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TBC1D5Q92609 795 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CHMP4CQ96CF2 233 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CEP95Q96GE4 821 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 AGAP2Q99490 1192 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SENP7Q9BQF6 1050 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 RIOK1Q9BRS2 568 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 NUP58Q9BVL2 599 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRRC3Q9BY71 257 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 KRTAP9-8Q9BYQ0 159 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 PRDM14Q9GZV8 571 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCED1AQ9H1Q7 454 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 DEF6Q9H4E7 631 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 AZI2Q9H6S1 392 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CNNM2Q9H8M5 875 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 RSAD1Q9HA92 442 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 CYP4F11Q9HBI6 524 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TM9SF3Q9HD45 589 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 ATP8A2Q9NTI2 1148 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 GAR1Q9NY12 217 aaKnown RBP2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 COL20A1Q9P218 1284 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 TLR6Q9Y2C9 796 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 SVEP1Q4LDE5 3571 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 MYO7BQ6PIF6 2116 aa2.38□□□□□ -2.03
TRAV1-1-201ENST00000542354 MYH8P13535 1937 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 GREB1LQ9C091 1923 aaPredicted RBP2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 A0A0B4J269 797 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 IGKV6D-41A0A0C4DH26 115 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 LOC100653049A0A140TA62 436 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 A0A1B0GVM2 712 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 FRMD3A2A2Y4 597 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 ANTXRLA6NF34 631 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 MROH6A6NGR9 719 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 BTBD18B2RXH4 712 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 F8W810 466 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMX2-CTNND1H3BSU7 103 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 NKX2-8O15522 239 aa2.37□□□□□ -2.03
TRAV1-1-201ENST00000542354 FIBPO43427 364 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms