RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RCOR2Q8IZ40 523 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 TTC16Q8NEE8 873 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 MNS1Q8NEH6 495 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 COG1Q8WTW3 980 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 LINC00597Q9H2U6 94 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 CCSER2Q9H7U1 834 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 TTC7AQ9ULT0 858 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-205ENST00000473879 WNT6Q9Y6F9 365 aa13.73□□□□□ -0.21
BRAT1-205ENST00000473879 SYNJ2BP-COX16A0A087WUM0 186 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-205ENST00000473879 ZNF185O15231 689 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 TLR5O60602 858 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 NFATC1O95644 943 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 IGLV3-25P01717 112 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 IL1R2P27930 398 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 GJA4P35212 333 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 PITX1P78337 314 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-205ENST00000473879 MTAPQ13126 283 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 NR1H3Q13133 447 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 CCINQ13939 588 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 SMTNL2Q2TAL5 461 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 TMEM196Q5HYL7 178 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 BRMS1LQ5PSV4 323 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 ERMARDQ5T6L9 678 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 ALYREFQ86V81 257 aaKnown RBP13.72□□□□□ -0.21
BRAT1-205ENST00000473879 FAM131BQ86XD5 332 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 CREG2Q8IUH2 290 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 MAIP1Q8WWC4 291 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 HSPH1Q92598 858 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 EXOC4Q96A65 974 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 NTAN1Q96AB6 310 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 CHFRQ96EP1 664 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 SNRNP25Q9BV90 132 aaKnown RBP13.72□□□□□ -0.21
BRAT1-205ENST00000473879 PRMT8Q9NR22 394 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-205ENST00000473879 PIGVQ9NUD9 493 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 COX16Q9P0S2 106 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 CFAP97Q9P2B7 532 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 AP4E1Q9UPM8 1137 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 FANCMQ8IYD8 2048 aa13.72□□□□□ -0.21
BRAT1-205ENST00000473879 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 RARAP10276 462 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 SLC2A3P11169 496 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 PYGMP11217 842 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 CXCR3P49682 368 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
BRAT1-205ENST00000473879 MTA1Q13330 715 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 ZNF211Q13398 564 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-205ENST00000473879 KRT81Q14533 505 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 PDK2Q15119 407 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 PPP2R5EQ16537 467 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 EFHC2Q5JST6 749 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 VSIG1Q86XK7 387 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 ADGRG2Q8IZP9 1017 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 KCTD6Q8NC69 237 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 RNF34Q969K3 372 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 NACA2Q9H009 215 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 WDCPQ9H6R7 721 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.71□□□□□ -0.21
BRAT1-205ENST00000473879 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
BRAT1-205ENST00000473879 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CTAGE15A4D2H0 777 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 ZNF487B1APH4 448 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 SLU7O95391 586 aaKnown RBP13.7□□□□□ -0.22
BRAT1-205ENST00000473879 FGGP02679 453 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CTAGE8P0CG41 777 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 DRD1P21728 446 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CCR1P32246 355 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 PTPN7P35236 360 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
BRAT1-205ENST00000473879 GALK1P51570 392 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CCR3P51677 355 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CDH6P55285 790 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
BRAT1-205ENST00000473879 SCAPQ12770 1279 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 EFEMP1Q12805 493 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-205ENST00000473879 GAS6Q14393 721 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 PPP2R5DQ14738 602 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 DPYSL2Q16555 572 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 LONRF2Q1L5Z9 754 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 ATP13A4Q4VNC1 1196 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 RAB6CQ53S08 254 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 KCNT1Q5JUK3 1230 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
BRAT1-205ENST00000473879 FSTL4Q6MZW2 842 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms