RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HNRNPLLQ8WVV9 542 aaKnown RBP14.32□□□□□ -0.12
CXCL12-202ENST00000374426 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TTC17Q96AE7 1141 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 MRGPRX3Q96LB0 322 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 STIM2Q9P246 746 aa14.32□□□□□ -0.12
CXCL12-202ENST00000374426 ARMCX3Q9UH62 379 aaPredicted RBP14.32□□□□□ -0.12
CXCL12-202ENST00000374426 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 FAM47DPA6NHR8 397 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 RNF225M0QZC1 329 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 VILLO15195 856 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 PAPSS1O43252 624 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 SIN3BO75182 1162 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 CALCAP01258 141 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 FYNP06241 537 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 CSKP41240 450 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 GALCP54803 685 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 RPS24P62847 133 aaKnown RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 RACK1P63244 317 aaKnown RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 CYP4F3Q08477 520 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 CNGA2Q16280 664 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 ZNF658Q5TYW1 1059 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 ADAT2Q7Z6V5 191 aaKnown RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 ZNF557Q8N988 423 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 HJURPQ8NCD3 748 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 GANCQ8TET4 914 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 KAT5Q92993 513 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 FCRL2Q96LA5 508 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-202ENST00000374426 SLC6A18Q96N87 628 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 TSG101Q99816 390 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 EBF2Q9HAK2 575 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 GDPD2Q9HCC8 539 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 FBXL12Q9NXK8 326 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 SCML1Q9UN30 329 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 NCKAP1Q9Y2A7 1128 aa14.31□□□□□ -0.12
CXCL12-202ENST00000374426 A0A1B0GTQ1 180 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 A0A1W2PPC4 97 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 C10orf142B7Z368 130 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 M0QYV0 167 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 MID1O15344 667 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 ASLP04424 464 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 BRD2P25440 801 aaKnown RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 FMO5P49326 533 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 ST8SIA6P61647 398 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 LRRC63Q05C16 580 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 KCNJ12Q14500 433 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 ARID5BQ14865 1188 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 CST6Q15828 149 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 CCDC157Q569K6 752 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 FSCBQ5H9T9 825 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 PRAMEF14Q5SWL7 426 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 NCEH1Q6PIU2 408 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 DHRS13Q6UX07 377 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 MMS22LQ6ZRQ5 1243 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 DHX40Q8IX18 779 aaKnown RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 FMR1NBQ8N0W7 255 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 HSFY1Q96LI6 401 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 ACE2Q9BYF1 805 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
CXCL12-202ENST00000374426 NEUROG2Q9H2A3 272 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 PCDHB4Q9Y5E5 795 aa14.3□□□□□ -0.12
CXCL12-202ENST00000374426 A0A1W2PP55 124 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 TTC34A8MYJ7 566 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 DFNA5O60443 496 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 RNASEH1O60930 286 aaKnown RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 FBXO21O94952 628 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 WNT1P04628 370 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 CTSOP43234 321 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 C21orf59P57076 290 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 CDH18Q13634 790 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 INAVAQ3KP66 663 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 MS4A13Q5J8X5 152 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 GATAD2AQ86YP4 633 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 MMAAQ8IVH4 418 aaKnown RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 CFAP52Q8N1V2 620 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 PPM1KQ8N3J5 372 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 CARNMT1Q8N4J0 409 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 KDM1BQ8NB78 822 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 SPATA20Q8TB22 786 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 SLC39A13Q96H72 371 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 LRIG1Q96JA1 1093 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 NT5C1BQ96P26 610 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 ELF4Q99607 663 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
CXCL12-202ENST00000374426 MIS12Q9H081 205 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 FTSJ1Q9UET6 329 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 ADAMTS1Q9UHI8 967 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 NAALADL1Q9UQQ1 740 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 TLR6Q9Y2C9 796 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 PLXNA2O75051 1894 aa14.29□□□□□ -0.12
CXCL12-202ENST00000374426 SETXQ7Z333 2677 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms