RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 MESDQ14696 234 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 MLF2Q15773 248 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 RAP1GAP2Q684P5 730 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 NADSYN1Q6IA69 706 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 ZNF852Q6ZMS4 543 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 HJURPQ8NCD3 748 aaPredicted RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 BTBD6Q96KE9 485 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 PHOX2BQ99453 314 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 PRMT1Q99873 361 aaKnown RBP20.24■□□□□ 0.83
CIRBP-220ENST00000588917 DESI2Q9BSY9 194 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 ARHGEF3Q9NR81 526 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 OR12D3Q9UGF7 316 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 FZD10Q9ULW2 581 aa20.24■□□□□ 0.83
CIRBP-220ENST00000588917 OTOL1A6NHN0 477 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 NEDD8-MDP1E9PL57 170 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 SPECC1L-ADORA2AF8WAN1 911 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 GFRA2O00451 464 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 TSPAN3O60637 253 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 PENKP01210 267 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 TYRP14679 529 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 ZNF135P52742 658 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 NRG1Q02297 640 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 FYB2Q5VWT5 728 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 LGI2Q8N0V4 545 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 RNF10Q8N5U6 811 aaKnown RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 ARFGAP1Q8N6T3 406 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 TTC8Q8TAM2 541 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 UBE2Q2Q8WVN8 375 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 IRF2BPLQ9H1B7 796 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 PCSK1NQ9UHG2 260 aa20.23■□□□□ 0.83
CIRBP-220ENST00000588917 XPO7Q9UIA9 1087 aaKnown RBP20.23■□□□□ 0.83
CIRBP-220ENST00000588917 RCCD1A6NED2 376 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 SLC6A4P31645 630 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 L1CAMP32004 1257 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 HTR7P34969 479 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 SSR1P43307 286 aaKnown RBP20.22■□□□□ 0.83
CIRBP-220ENST00000588917 NUBP1P53384 320 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 STARD6P59095 220 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 RAB6CQ53S08 254 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 RFWD3Q6PCD5 774 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 CCDC185Q8N715 623 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 TEKT4Q8WW24 435 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 FAM3CQ92520 227 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 RPRD1AQ96P16 312 aaPredicted RBP20.22■□□□□ 0.83
CIRBP-220ENST00000588917 LACRTQ9GZZ8 138 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 RAB6CQ9H0N0 254 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 DEC1Q9P2X7 70 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 CA14Q9ULX7 337 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 MYO10Q9HD67 2058 aa20.22■□□□□ 0.83
CIRBP-220ENST00000588917 DRGXA6NNA5 263 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 TRDMT1O14717 391 aaKnown RBP20.21■□□□□ 0.83
CIRBP-220ENST00000588917 CACNG3O60359 315 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 TBL1XO60907 577 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 KRT7P08729 469 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 CTHP32929 405 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 C5orf22Q49AR2 442 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 FBXL22Q6P050 247 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 TPRG1Q6ZUI0 275 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 SIX5Q8N196 739 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 CCDC26Q8TAB7 109 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 CD101Q93033 1021 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 PNKPQ96T60 521 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 EPAS1Q99814 870 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 P2RY13Q9BPV8 354 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 ANLNQ9NQW6 1124 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 DONSONQ9NYP3 566 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 STIM2Q9P246 746 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 PPARGC1AQ9UBK2 798 aaKnown RBP20.21■□□□□ 0.83
CIRBP-220ENST00000588917 VANGL2Q9ULK5 521 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 TFR2Q9UP52 801 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 DUSP10Q9Y6W6 482 aa20.21■□□□□ 0.83
CIRBP-220ENST00000588917 CACNA1HO95180 2353 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 TMEM110-MUSTN1A8MSY1 372 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 E9PAM4 449 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 NCAM2O15394 837 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 ZSCAN12O43309 604 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 SRGAP2O75044 1071 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 CLDN11O75508 207 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 PDGFBP01127 241 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-220ENST00000588917 OXCT1P55809 520 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 SYCE1Q8N0S2 351 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 TPCN2Q8NHX9 752 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 KIAA1524Q8TCG1 905 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 FBXO10Q9UK96 956 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 AP4E1Q9UPM8 1137 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 ALG6Q9Y672 507 aa20.2■□□□□ 0.82
CIRBP-220ENST00000588917 IGLV3-10A0A075B6K4 115 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 KANSL1LA0AUZ9 987 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 I6L893 689 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-220ENST00000588917 STK25O00506 426 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 BUB1BO60566 1050 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-220ENST00000588917 DRD1P21728 446 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 DGKGP49619 791 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 GALK1P51570 392 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 CDH4P55283 916 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 GRSF1Q12849 480 aaKnown RBP eCLIP20.19■□□□□ 0.82
CIRBP-220ENST00000588917 E2F5Q15329 346 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 LRRC38Q5VT99 294 aa20.19■□□□□ 0.82
CIRBP-220ENST00000588917 C11orf63Q6NUN7 778 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms