RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 FAM228BP0C875 321 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 TACR2P21452 398 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 GPD1P21695 349 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 HOXC13P31276 330 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 SDC4P31431 198 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 FNTBP49356 437 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 ASTE1Q2TB18 679 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 PREPLQ4J6C6 727 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 RAB6CQ53S08 254 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 STRADAQ7RTN6 431 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 LONP2Q86WA8 852 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 CHSY1Q86X52 802 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 CNGA4Q8IV77 575 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 DCLK2Q8N568 766 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 HJURPQ8NCD3 748 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 CENPIQ92674 756 aaPredicted RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 MCEEQ96PE7 176 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 DDX50Q9BQ39 737 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 ANP32EQ9BTT0 268 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 RAB6CQ9H0N0 254 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 TMEM51Q9NW97 253 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 HCN2Q9UL51 889 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 SMG5Q9UPR3 1016 aaKnown RBP16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 HS3ST4Q9Y661 456 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 FAM186AA6NE01 2351 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 DMDP11532 3685 aa16.05■□□□□ 0.16
RABGGTA-219ENST00000560871 SSU72P8A0A1W2PR75 194 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 PRRT4C9JH25 899 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 CCP110O43303 1012 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 HRO43593 1189 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 PAGE1O75459 146 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 F9P00740 461 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 TPM1P09493 284 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 PDGFRAP16234 1089 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 ABCB4P21439 1286 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 CNR2P34972 360 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 TNFRSF4P43489 277 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 KIR2DL1P43626 348 aaPredicted RBP16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 HDAC4P56524 1084 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 ATP11AP98196 1134 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 OGDHQ02218 1023 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 MTA1Q13330 715 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 CDO1Q16878 200 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 GEN1Q17RS7 908 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 ARTNQ5T4W7 220 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 VPS36Q86VN1 386 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 FAM131BQ86XD5 332 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 RPLP0P6Q8NHW5 317 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 WFDC5Q8TCV5 224 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 USP33Q8TEY7 942 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 ZNF653Q96CK0 615 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 TMA16Q96EY4 203 aaKnown RBP16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 SLC2A11Q9BYW1 496 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 TKTL2Q9H0I9 626 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 WDCPQ9H6R7 721 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 STARD13Q9Y3M8 1113 aa16.04■□□□□ 0.16
RABGGTA-219ENST00000560871 AKR1B15C9JRZ8 316 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 TBL1XO60907 577 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 MYBL1P10243 752 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 HLA-FP30511 346 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 GGCXP38435 758 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 EIF4A3P38919 411 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 ZNF143P52747 638 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 SEC13P55735 322 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 RPS24P62847 133 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 C10orf76Q5T2E6 689 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 KIAA0907Q7Z7F0 614 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 WDR5BQ86VZ2 330 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 ZNF683Q8IZ20 524 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 CCDC26Q8TAB7 109 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 FAM172AQ8WUF8 416 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 RNF34Q969K3 372 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 TRIM11Q96F44 468 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 PARVAQ9NVD7 372 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 NCDNQ9UBB6 729 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 PAXBP1Q9Y5B6 917 aa16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 MUC22E2RYF6 1773 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-219ENST00000560871 RIF1Q5UIP0 2472 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 TBC1D3BA6NDS4 549 aa16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 F5H5T6 163 aa16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 AUHQ13825 339 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 SLC18A3Q16572 532 aa16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 C5orf22Q49AR2 442 aa16.02■□□□□ 0.16
RABGGTA-219ENST00000560871 EMC10Q5UCC4 262 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms